RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FAM208AQ9UK61 1670 aaKnown RBP10.86□□□□□ -0.67
VPS45-210ENST00000497638 KCNQ4P56696 695 aa10.86□□□□□ -0.67
VPS45-210ENST00000497638 PGBD3Q8N328 593 aa10.86□□□□□ -0.67
VPS45-210ENST00000497638 FLAD1Q8NFF5 587 aa10.86□□□□□ -0.67
VPS45-210ENST00000497638 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
VPS45-210ENST00000497638 ACDQ96AP0 544 aa10.86□□□□□ -0.67
VPS45-210ENST00000497638 SYTL4Q96C24 671 aaPredicted RBP10.86□□□□□ -0.67
VPS45-210ENST00000497638 DNMT3AQ9Y6K1 912 aaPredicted RBP10.86□□□□□ -0.67
VPS45-210ENST00000497638 NSD2O96028 1365 aa10.86□□□□□ -0.67
VPS45-210ENST00000497638 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
VPS45-210ENST00000497638 C4orf17Q53FE4 359 aa10.85□□□□□ -0.67
VPS45-210ENST00000497638 MSL1Q68DK7 614 aa10.85□□□□□ -0.67
VPS45-210ENST00000497638 DNAJC5GQ8N7S2 189 aa10.85□□□□□ -0.67
VPS45-210ENST00000497638 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
VPS45-210ENST00000497638 PHF24Q9UPV7 400 aa10.85□□□□□ -0.67
VPS45-210ENST00000497638 CICQ96RK0 1608 aaPredicted RBP10.84□□□□□ -0.67
VPS45-210ENST00000497638 TLR1Q15399 786 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 WASHC4Q2M389 1173 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 GPAT2Q6NUI2 795 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 PODNQ7Z5L7 613 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 CFHR5Q9BXR6 569 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 RUBCNLQ9H714 662 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 USP47Q96K76 1375 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 CNTNAP5Q8WYK1 1306 aa10.84□□□□□ -0.67
VPS45-210ENST00000497638 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
VPS45-210ENST00000497638 TOMM70O94826 608 aa10.83□□□□□ -0.68
VPS45-210ENST00000497638 SEMA3FQ13275 785 aa10.83□□□□□ -0.68
VPS45-210ENST00000497638 BEND7Q8N7W2 519 aaPredicted RBP10.83□□□□□ -0.68
VPS45-210ENST00000497638 RHBDD1Q8TEB9 315 aa10.83□□□□□ -0.68
VPS45-210ENST00000497638 C5P01031 1676 aa10.82□□□□□ -0.68
VPS45-210ENST00000497638 MAP2K3P46734 347 aa10.82□□□□□ -0.68
VPS45-210ENST00000497638 WDR90Q96KV7 1748 aa10.81□□□□□ -0.68
VPS45-210ENST00000497638 THBS1P07996 1170 aa10.81□□□□□ -0.68
VPS45-210ENST00000497638 MSX1P28360 303 aa10.81□□□□□ -0.68
VPS45-210ENST00000497638 LBRQ14739 615 aaKnown RBP10.81□□□□□ -0.68
VPS45-210ENST00000497638 EFHC2Q5JST6 749 aa10.81□□□□□ -0.68
VPS45-210ENST00000497638 NME9Q86XW9 330 aa10.81□□□□□ -0.68
VPS45-210ENST00000497638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS45-210ENST00000497638 NSD3Q9BZ95 1437 aa10.81□□□□□ -0.68
VPS45-210ENST00000497638 SBNO2Q9Y2G9 1366 aa10.8□□□□□ -0.68
VPS45-210ENST00000497638 SUZ12Q15022 739 aaKnown RBP10.8□□□□□ -0.68
VPS45-210ENST00000497638 MAP7D1Q3KQU3 841 aa10.8□□□□□ -0.68
VPS45-210ENST00000497638 ZCRB1Q8TBF4 217 aaKnown RBP10.8□□□□□ -0.68
VPS45-210ENST00000497638 IP6K1Q92551 441 aa10.8□□□□□ -0.68
VPS45-210ENST00000497638 OXCT2Q9BYC2 517 aaPredicted RBP10.8□□□□□ -0.68
VPS45-210ENST00000497638 TAF1LQ8IZX4 1826 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 PRELPP51888 382 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 GDF10P55107 478 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 FOXK2Q01167 660 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
VPS45-210ENST00000497638 JMYQ8N9B5 988 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 PLPP7Q8NBV4 271 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
VPS45-210ENST00000497638 EDC4Q6P2E9 1401 aaKnown RBP10.78□□□□□ -0.68
VPS45-210ENST00000497638 OIP5O43482 229 aa10.78□□□□□ -0.68
VPS45-210ENST00000497638 IGHA1P01876 353 aa10.78□□□□□ -0.68
VPS45-210ENST00000497638 PLA2G4AP47712 749 aa10.78□□□□□ -0.68
VPS45-210ENST00000497638 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
VPS45-210ENST00000497638 CGNL1Q0VF96 1302 aa10.78□□□□□ -0.68
VPS45-210ENST00000497638 MEGF6O75095 1541 aa10.78□□□□□ -0.68
VPS45-210ENST00000497638 PALLDQ8WX93 1383 aa10.77□□□□□ -0.68
VPS45-210ENST00000497638 CD163L1Q9NR16 1453 aa10.77□□□□□ -0.69
VPS45-210ENST00000497638 INHAP05111 366 aa10.77□□□□□ -0.69
VPS45-210ENST00000497638 TBC1D9Q6ZT07 1266 aa10.77□□□□□ -0.69
VPS45-210ENST00000497638 LTV1Q96GA3 475 aaPredicted RBP10.77□□□□□ -0.69
VPS45-210ENST00000497638 WWC3Q9ULE0 1092 aa10.77□□□□□ -0.69
VPS45-210ENST00000497638 C4BP0C0L5 1744 aa10.77□□□□□ -0.69
VPS45-210ENST00000497638 UBR3Q6ZT12 1888 aa10.76□□□□□ -0.69
VPS45-210ENST00000497638 TOGARAM1Q9Y4F4 1720 aa10.76□□□□□ -0.69
VPS45-210ENST00000497638 SOX11P35716 441 aa10.76□□□□□ -0.69
VPS45-210ENST00000497638 SCNN1DP51172 638 aa10.76□□□□□ -0.69
VPS45-210ENST00000497638 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
VPS45-210ENST00000497638 GALNT6Q8NCL4 622 aa10.76□□□□□ -0.69
VPS45-210ENST00000497638 AIDAQ96BJ3 306 aa10.76□□□□□ -0.69
VPS45-210ENST00000497638 ATXN7L1Q9ULK2 861 aaPredicted RBP10.76□□□□□ -0.69
VPS45-210ENST00000497638 PCNTO95613 3336 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 FSTL1Q12841 308 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 MCM6Q14566 821 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 ABHD17AQ96GS6 310 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 NMRK2Q9NPI5 230 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 SERTAD1Q9UHV2 236 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
VPS45-210ENST00000497638 PLEKHG2Q9H7P9 1386 aa10.75□□□□□ -0.69
VPS45-210ENST00000497638 BMP4P12644 408 aa10.74□□□□□ -0.69
VPS45-210ENST00000497638 SSFA2P28290 1259 aa10.74□□□□□ -0.69
VPS45-210ENST00000497638 UBAP2LQ14157 1087 aaKnown RBP10.74□□□□□ -0.69
VPS45-210ENST00000497638 C16orf71Q8IYS4 520 aaPredicted RBP10.74□□□□□ -0.69
VPS45-210ENST00000497638 SMARCC1Q92922 1105 aaPredicted RBP10.74□□□□□ -0.69
VPS45-210ENST00000497638 NIFKQ9BYG3 293 aaKnown RBP10.74□□□□□ -0.69
VPS45-210ENST00000497638 GDF2Q9UK05 429 aaPredicted RBP10.74□□□□□ -0.69
VPS45-210ENST00000497638 KIF13BQ9NQT8 1826 aa10.74□□□□□ -0.69
VPS45-210ENST00000497638 PXDNLA1KZ92 1463 aa10.74□□□□□ -0.69
VPS45-210ENST00000497638 RGPD2P0DJD1 1756 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 FGFR3P22607 806 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 HOXC9P31274 260 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 SMTNP53814 917 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 DCAF5Q96JK2 942 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 CRISPLD1Q9H336 500 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 RRAGCQ9HB90 399 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms