RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 EGFRP00533 1210 aa24.19■■□□□ 1.46
ACTN4-208ENST00000497637 EPHA10Q5JZY3 1008 aa24.19■■□□□ 1.46
ACTN4-208ENST00000497637 DDX46Q7L014 1031 aaKnown RBP24.19■■□□□ 1.46
ACTN4-208ENST00000497637 UBE3BQ7Z3V4 1068 aa24.19■■□□□ 1.46
ACTN4-208ENST00000497637 ERC1Q8IUD2 1116 aa24.19■■□□□ 1.46
ACTN4-208ENST00000497637 UPF2Q9HAU5 1272 aaKnown RBP24.19■■□□□ 1.46
ACTN4-208ENST00000497637 MKI67P46013 3256 aaKnown RBP24.19■■□□□ 1.46
ACTN4-208ENST00000497637 AOX1Q06278 1338 aa24.18■■□□□ 1.46
ACTN4-208ENST00000497637 GPR25O00155 361 aa24.18■■□□□ 1.46
ACTN4-208ENST00000497637 WASHC4Q2M389 1173 aa24.18■■□□□ 1.46
ACTN4-208ENST00000497637 CDCA5Q96FF9 252 aa24.18■■□□□ 1.46
ACTN4-208ENST00000497637 DDRGK1Q96HY6 314 aa24.18■■□□□ 1.46
ACTN4-208ENST00000497637 NUP98P52948 1817 aa24.17■■□□□ 1.46
ACTN4-208ENST00000497637 CDC45O75419 566 aa24.17■■□□□ 1.46
ACTN4-208ENST00000497637 KIF4BQ2VIQ3 1234 aa24.17■■□□□ 1.46
ACTN4-208ENST00000497637 GGA3Q9NZ52 723 aa24.17■■□□□ 1.46
ACTN4-208ENST00000497637 EIF5BO60841 1220 aaKnown RBP24.16■■□□□ 1.46
ACTN4-208ENST00000497637 GRAPQ13588 217 aa24.16■■□□□ 1.46
ACTN4-208ENST00000497637 HSP90AB3PQ58FF7 597 aa24.16■■□□□ 1.46
ACTN4-208ENST00000497637 GRAPLQ8TC17 118 aaPredicted RBP24.16■■□□□ 1.46
ACTN4-208ENST00000497637 MX1P20591 662 aa24.15■■□□□ 1.46
ACTN4-208ENST00000497637 TM4SF4P48230 202 aa24.15■■□□□ 1.46
ACTN4-208ENST00000497637 JARID2Q92833 1246 aaPredicted RBP24.15■■□□□ 1.46
ACTN4-208ENST00000497637 FKTNO75072 461 aa24.14■■□□□ 1.45
ACTN4-208ENST00000497637 G3BP1Q13283 466 aaKnown RBP eCLIP24.14■■□□□ 1.457e-13■■□□□ 13.1
ACTN4-208ENST00000497637 OS9Q13438 667 aaPredicted RBP24.14■■□□□ 1.45
ACTN4-208ENST00000497637 TBC1D32Q96NH3 1257 aa24.14■■□□□ 1.45
ACTN4-208ENST00000497637 IL1RAPL2Q9NP60 686 aa24.14■■□□□ 1.45
ACTN4-208ENST00000497637 COPRSQ9NQ92 184 aa24.14■■□□□ 1.45
ACTN4-208ENST00000497637 PA2G4Q9UQ80 394 aaKnown RBP24.14■■□□□ 1.45
ACTN4-208ENST00000497637 POLR2AP24928 1970 aaKnown RBP24.13■■□□□ 1.45
ACTN4-208ENST00000497637 RFX5P48382 616 aaPredicted RBP24.13■■□□□ 1.45
ACTN4-208ENST00000497637 FOXO4P98177 505 aa24.13■■□□□ 1.45
ACTN4-208ENST00000497637 TBC1D9Q6ZT07 1266 aa24.13■■□□□ 1.45
ACTN4-208ENST00000497637 CFHR5Q9BXR6 569 aa24.13■■□□□ 1.45
ACTN4-208ENST00000497637 BCL11AQ9H165 835 aa24.13■■□□□ 1.45
ACTN4-208ENST00000497637 DBNDD1Q9H9R9 158 aa24.13■■□□□ 1.45
ACTN4-208ENST00000497637 SDSP20132 328 aa24.12■■□□□ 1.45
ACTN4-208ENST00000497637 PCCAP05165 728 aaPredicted RBP24.11■■□□□ 1.45
ACTN4-208ENST00000497637 MFAP1P55081 439 aaKnown RBP24.1■■□□□ 1.45
ACTN4-208ENST00000497637 SREBF2Q12772 1141 aa24.1■■□□□ 1.45
ACTN4-208ENST00000497637 CLASRPQ8N2M8 674 aaKnown RBP24.1■■□□□ 1.45
ACTN4-208ENST00000497637 EYA3Q99504 573 aa24.1■■□□□ 1.45
ACTN4-208ENST00000497637 ECE2O60344 883 aa24.09■■□□□ 1.45
ACTN4-208ENST00000497637 VIL1P09327 827 aaKnown RBP24.09■■□□□ 1.45
ACTN4-208ENST00000497637 LMBR1LQ6UX01 489 aa24.09■■□□□ 1.45
ACTN4-208ENST00000497637 PLA2G12BQ9BX93 195 aa24.09■■□□□ 1.45
ACTN4-208ENST00000497637 NSFL1CQ9UNZ2 370 aaKnown RBP24.09■■□□□ 1.45
ACTN4-208ENST00000497637 C6orf229H3BNL8 230 aa24.08■■□□□ 1.45
ACTN4-208ENST00000497637 SASH1O94885 1247 aa24.08■■□□□ 1.45
ACTN4-208ENST00000497637 HCLS1P14317 486 aaPredicted RBP24.08■■□□□ 1.45
ACTN4-208ENST00000497637 ANGEL2Q5VTE6 544 aaKnown RBP24.08■■□□□ 1.45
ACTN4-208ENST00000497637 PITPNM2Q9BZ72 1349 aa24.08■■□□□ 1.44
ACTN4-208ENST00000497637 PAPPA2Q9BXP8 1791 aa24.07■■□□□ 1.44
ACTN4-208ENST00000497637 ZNF280AP59817 542 aaPredicted RBP24.07■■□□□ 1.44
ACTN4-208ENST00000497637 PTPN12Q05209 780 aaKnown RBP24.07■■□□□ 1.44
ACTN4-208ENST00000497637 SCARF1Q14162 830 aa24.07■■□□□ 1.44
ACTN4-208ENST00000497637 NLRP10Q86W26 655 aa24.07■■□□□ 1.44
ACTN4-208ENST00000497637 ZBTB38Q8NAP3 1195 aaPredicted RBP24.07■■□□□ 1.44
ACTN4-208ENST00000497637 C22orf23Q9BZE7 217 aa24.07■■□□□ 1.44
ACTN4-208ENST00000497637 RTL9Q8NET4 1388 aa24.06■■□□□ 1.44
ACTN4-208ENST00000497637 RIMBP2O15034 1052 aa24.06■■□□□ 1.44
ACTN4-208ENST00000497637 ALDH1A1P00352 501 aa24.06■■□□□ 1.44
ACTN4-208ENST00000497637 TTC41PQ6P2S7 1318 aa24.06■■□□□ 1.44
ACTN4-208ENST00000497637 KIAA0100Q14667 2235 aaKnown RBP24.05■■□□□ 1.44
ACTN4-208ENST00000497637 POTEFA5A3E0 1075 aa24.05■■□□□ 1.44
ACTN4-208ENST00000497637 CASC1Q6TDU7 716 aa24.05■■□□□ 1.44
ACTN4-208ENST00000497637 KCNQ5Q9NR82 932 aa24.05■■□□□ 1.44
ACTN4-208ENST00000497637 ASTN2O75129 1339 aaPredicted RBP24.05■■□□□ 1.44
ACTN4-208ENST00000497637 SH3TC1Q8TE82 1336 aa24.05■■□□□ 1.44
ACTN4-208ENST00000497637 DUOX1Q9NRD9 1551 aa24.04■■□□□ 1.44
ACTN4-208ENST00000497637 UBE2Q2LH0YL09 131 aa24.04■■□□□ 1.44
ACTN4-208ENST00000497637 AGBL3Q8NEM8 1001 aa24.04■■□□□ 1.44
ACTN4-208ENST00000497637 PI4K2BQ8TCG2 481 aa24.04■■□□□ 1.44
ACTN4-208ENST00000497637 POLLQ9UGP5 575 aa24.04■■□□□ 1.44
ACTN4-208ENST00000497637 TRMT112Q9UI30 125 aaKnown RBP24.04■■□□□ 1.44
ACTN4-208ENST00000497637 IFIT2P09913 472 aaKnown RBP24.03■■□□□ 1.44
ACTN4-208ENST00000497637 RBM25P49756 843 aaKnown RBP24.03■■□□□ 1.44
ACTN4-208ENST00000497637 DOK7Q18PE1 504 aa24.03■■□□□ 1.44
ACTN4-208ENST00000497637 TSHZ3Q63HK5 1081 aa24.03■■□□□ 1.44
ACTN4-208ENST00000497637 KLHDC4Q8TBB5 520 aa24.03■■□□□ 1.44
ACTN4-208ENST00000497637 ZC3H12CQ9C0D7 883 aaKnown RBP24.03■■□□□ 1.44
ACTN4-208ENST00000497637 HTTP42858 3142 aa24.02■■□□□ 1.44
ACTN4-208ENST00000497637 SIL1Q9H173 461 aa24.02■■□□□ 1.44
ACTN4-208ENST00000497637 COLQQ9Y215 455 aaPredicted RBP24.02■■□□□ 1.44
ACTN4-208ENST00000497637 TRIM17Q9Y577 477 aa24.02■■□□□ 1.44
ACTN4-208ENST00000497637 G3V3G9 751 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 DLL1O00548 723 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 GLRX3O76003 335 aaKnown RBP24.01■■□□□ 1.43
ACTN4-208ENST00000497637 CSF1RP07333 972 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 NF2P35240 595 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 TTLL12Q14166 644 aaPredicted RBP24.01■■□□□ 1.43
ACTN4-208ENST00000497637 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
ACTN4-208ENST00000497637 DCAF8Q5TAQ9 597 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 AACSQ86V21 672 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 GPATCH3Q96I76 525 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 ECHDC1Q9NTX5 307 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 ANKRD36CQ5JPF3 1778 aa24.01■■□□□ 1.43
ACTN4-208ENST00000497637 TRIOBPQ9H2D6 2365 aa24■■□□□ 1.43
ACTN4-208ENST00000497637 ERC2O15083 957 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms