RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-209ENST00000497564 UQCRFS1P1P0C7P4 283 aa17.22■□□□□ 0.35
VPS26A-209ENST00000497564 ARID4AP29374 1257 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-209ENST00000497564 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
VPS26A-209ENST00000497564 XDHP47989 1333 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 YDJCA8MPS7 323 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 CHMLP26374 656 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
VPS26A-209ENST00000497564 GPC2Q8N158 579 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 TBC1D16Q8TBP0 767 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 TAF1DQ9H5J8 278 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-209ENST00000497564 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
VPS26A-209ENST00000497564 PCNTO95613 3336 aa17.21■□□□□ 0.34
VPS26A-209ENST00000497564 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.34
VPS26A-209ENST00000497564 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 SEC24BO95487 1268 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-209ENST00000497564 HTRA3P83110 453 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 CXCL9Q07325 125 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 ZNRF3Q9ULT6 936 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
VPS26A-209ENST00000497564 SCN4AP35499 1836 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 SNAP23O00161 211 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 HIP1O00291 1037 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 RAD17O75943 681 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 PHKA1P46020 1223 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 SCNN1DP51172 638 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 FSTL1Q12841 308 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 C15orf52Q6ZUT6 534 aaKnown RBP17.19■□□□□ 0.34
VPS26A-209ENST00000497564 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
VPS26A-209ENST00000497564 MAST2Q6P0Q8 1798 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 UFL1O94874 794 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 KCNQ5Q9NR82 932 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
VPS26A-209ENST00000497564 RBM19Q9Y4C8 960 aaKnown RBP17.18■□□□□ 0.34
VPS26A-209ENST00000497564 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 ATP2B4P23634 1241 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 EPHX2P34913 555 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 EPS15P42566 896 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 MCAMP43121 646 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 KCNJ4P48050 445 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 SCARF1Q14162 830 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
VPS26A-209ENST00000497564 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
VPS26A-209ENST00000497564 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
VPS26A-209ENST00000497564 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-209ENST00000497564 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-209ENST00000497564 ESYT1Q9BSJ8 1104 aa17.16■□□□□ 0.34
VPS26A-209ENST00000497564 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
VPS26A-209ENST00000497564 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
VPS26A-209ENST00000497564 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
VPS26A-209ENST00000497564 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
VPS26A-209ENST00000497564 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
VPS26A-209ENST00000497564 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 GOLIM4O00461 696 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 SEMA3EO15041 775 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
VPS26A-209ENST00000497564 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-209ENST00000497564 BCAMP50895 628 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-209ENST00000497564 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
VPS26A-209ENST00000497564 RAD50Q92878 1312 aa17.15■□□□□ 0.34
VPS26A-209ENST00000497564 PSME4Q14997 1843 aa17.14■□□□□ 0.34
VPS26A-209ENST00000497564 SGSM2O43147 1006 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 ECE2O60344 883 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 REC8O95072 547 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 MFAP1P55081 439 aaKnown RBP17.14■□□□□ 0.33
VPS26A-209ENST00000497564 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-209ENST00000497564 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
VPS26A-209ENST00000497564 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-209ENST00000497564 PSMD14O00487 310 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 ZAP70P43403 619 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 GYG1P46976 350 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 APLP1P51693 650 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 LRRFIP1Q32MZ4 808 aaKnown RBP17.13■□□□□ 0.33
VPS26A-209ENST00000497564 LDHDQ86WU2 507 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
VPS26A-209ENST00000497564 EYA3Q99504 573 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms