RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 LRCH3Q96II8 777 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 CDC5LQ99459 802 aaKnown RBP13.57□□□□□ -0.24
TOM1-217ENST00000497448 MYD88Q99836 296 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
TOM1-217ENST00000497448 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 ZFYVE28Q9HCC9 887 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 AOX1Q06278 1338 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 CTSWP56202 376 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 GTF2IP78347 998 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 MTFR1Q15390 333 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
TOM1-217ENST00000497448 BSDC1Q9NW68 430 aaPredicted RBP13.56□□□□□ -0.24
TOM1-217ENST00000497448 CCL15-CCL14A0A0B4J2E2 113 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 CHL1O00533 1208 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 CCL15Q16663 113 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 CERS5Q8N5B7 392 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 VEZTQ9HBM0 779 aa13.55□□□□□ -0.24
TOM1-217ENST00000497448 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
TOM1-217ENST00000497448 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
TOM1-217ENST00000497448 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
TOM1-217ENST00000497448 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
TOM1-217ENST00000497448 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
TOM1-217ENST00000497448 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
TOM1-217ENST00000497448 LACTBP83111 547 aaPredicted RBP13.54□□□□□ -0.24
TOM1-217ENST00000497448 HTATIP2Q9BUP3 242 aa13.54□□□□□ -0.24
TOM1-217ENST00000497448 GREM2Q9H772 168 aa13.54□□□□□ -0.24
TOM1-217ENST00000497448 MYO1BO43795 1136 aa13.53□□□□□ -0.24
TOM1-217ENST00000497448 RASA3Q14644 834 aa13.53□□□□□ -0.24
TOM1-217ENST00000497448 CFAP100Q494V2 611 aa13.53□□□□□ -0.24
TOM1-217ENST00000497448 PHAXQ9H814 394 aaKnown RBP13.53□□□□□ -0.24
TOM1-217ENST00000497448 LEMD3Q9Y2U8 911 aa13.53□□□□□ -0.24
TOM1-217ENST00000497448 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
TOM1-217ENST00000497448 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
TOM1-217ENST00000497448 TLR2O60603 784 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 GJA8P48165 433 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 GTF2A2P52657 109 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 KIF22Q14807 665 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.52□□□□□ -0.25
TOM1-217ENST00000497448 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
TOM1-217ENST00000497448 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.25
TOM1-217ENST00000497448 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
TOM1-217ENST00000497448 GNRH1P01148 92 aa13.51□□□□□ -0.25
TOM1-217ENST00000497448 PRMT2P55345 433 aa13.51□□□□□ -0.25
TOM1-217ENST00000497448 VGLL4Q14135 290 aa13.51□□□□□ -0.25
TOM1-217ENST00000497448 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
TOM1-217ENST00000497448 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
TOM1-217ENST00000497448 IRS2Q9Y4H2 1338 aa13.5□□□□□ -0.25
TOM1-217ENST00000497448 CTGFP29279 349 aa13.5□□□□□ -0.25
TOM1-217ENST00000497448 MGAMO43451 1857 aa13.5□□□□□ -0.25
TOM1-217ENST00000497448 FARP2O94887 1054 aaPredicted RBP13.49□□□□□ -0.25
TOM1-217ENST00000497448 GJB1P08034 283 aa13.49□□□□□ -0.25
TOM1-217ENST00000497448 CCL5P13501 91 aa13.49□□□□□ -0.25
TOM1-217ENST00000497448 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
TOM1-217ENST00000497448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.49□□□□□ -0.25
TOM1-217ENST00000497448 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
TOM1-217ENST00000497448 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
TOM1-217ENST00000497448 COL25A1Q9BXS0 654 aaPredicted RBP13.49□□□□□ -0.25
TOM1-217ENST00000497448 SRRDQ9UH36 339 aa13.49□□□□□ -0.25
TOM1-217ENST00000497448 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 WDHD1O75717 1129 aaPredicted RBP13.48□□□□□ -0.25
TOM1-217ENST00000497448 OSBPP22059 807 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 GRK4P32298 578 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 TRIM47Q96LD4 638 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 ANKRD2Q9GZV1 360 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
TOM1-217ENST00000497448 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 VCANP13611 3396 aa13.48□□□□□ -0.25
TOM1-217ENST00000497448 SPDYE5A6NIY4 337 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 KCNJ4P48050 445 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
TOM1-217ENST00000497448 FKBP1AP62942 108 aaKnown RBP13.47□□□□□ -0.25
TOM1-217ENST00000497448 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 C17orf99Q6UX52 265 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 Q7L0L9 218 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 RAET1EQ8TD07 263 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 RNF208Q9H0X6 261 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 JAG2Q9Y219 1238 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 CSADQ9Y600 493 aa13.47□□□□□ -0.25
TOM1-217ENST00000497448 MYPNQ86TC9 1320 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 SNAP23O00161 211 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 EVI5O60447 810 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 IGKV5-2P06315 115 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms