RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	PDXDC2P	Q6P474	469 aa		7.42	□□□□□ -1.22
UBE3C-208	ENST00000497368	ZNF790	Q6PG37	636 aa		7.42	□□□□□ -1.22
UBE3C-208	ENST00000497368	SLC51A	Q86UW1	340 aa		7.42	□□□□□ -1.22
UBE3C-208	ENST00000497368	OCSTAMP	Q9BR26	566 aa		7.42	□□□□□ -1.22
UBE3C-208	ENST00000497368	SENP3-EIF4A1	A0A087X0R7	540 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	GNAT3	A8MTJ3	354 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	NFKBIE	O00221	500 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	CAMTA2	O94983	1202 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	NR3C2	P08235	984 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	TBC1D9B	Q66K14	1250 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	NBPF10	Q6P3W6	841 aa	Known RBP	7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	MCM10	Q7L590	875 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	NBPF15	Q8N660	670 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	GAS2L2	Q8NHY3	880 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	ZNF526	Q8TF50	670 aa	Predicted RBP	7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	PLEKHF1	Q96S99	279 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	BCS1L	Q9Y276	419 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	TAF1	P21675	1872 aa		7.41	□□□□□ -1.22
UBE3C-208	ENST00000497368	CAPN5	O15484	640 aa	Predicted RBP	7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	A1BG	P04217	495 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	CANX	P27824	592 aa	Known RBP	7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	GRM5	P41594	1212 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	VASH1	Q7L8A9	365 aa	Predicted RBP	7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	ZBTB33	Q86T24	672 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	TRMT44	Q8IYL2	757 aa	Known RBP	7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	NMRK2	Q9NPI5	230 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	ATP13A2	Q9NQ11	1180 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	SNRK	Q9NRH2	765 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	GMPR2	Q9P2T1	348 aa	Known RBP	7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	PARP3	Q9Y6F1	533 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	ABCC12	Q96J65	1359 aa		7.4	□□□□□ -1.22
UBE3C-208	ENST00000497368	ZNF646	O15015	1829 aa	Predicted RBP	7.4	□□□□□ -1.23
UBE3C-208	ENST00000497368	DUOX1	Q9NRD9	1551 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	BMP1	P13497	986 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	FSHR	P23945	695 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	HMGB2	P26583	209 aa	Known RBP	7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	PTK2	Q05397	1052 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	PRR5L	Q6MZQ0	368 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	MTMR14	Q8NCE2	650 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	PNMA1	Q8ND90	353 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	BANK1	Q8NDB2	785 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	USP16	Q9Y5T5	823 aa		7.39	□□□□□ -1.23
UBE3C-208	ENST00000497368	SERPINB2	P05120	415 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	IL6ST	P40189	918 aa	Predicted RBP	7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	WDR4	P57081	412 aa	Known RBP	7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	NR5A1	Q13285	461 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	C9orf131	Q5VYM1	1079 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	LRP10	Q7Z4F1	713 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	ADAM32	Q8TC27	787 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	THUMPD2	Q9BTF0	503 aa	Known RBP	7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	TBC1D2B	Q9UPU7	963 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	MAP4K5	Q9Y4K4	846 aa		7.38	□□□□□ -1.23
UBE3C-208	ENST00000497368	RIC1	Q4ADV7	1423 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	TIMP2	P16035	220 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	TEF	Q10587	303 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	SLC10A4	Q96EP9	437 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	FMNL2	Q96PY5	1086 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	ZFAND3	Q9H8U3	227 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	PIM2	Q9P1W9	311 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	GPSM3	Q9Y4H4	160 aa		7.37	□□□□□ -1.23
UBE3C-208	ENST00000497368	SCN4A	P35499	1836 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	BTBD11	A6QL63	1104 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	ZIC2	O95409	532 aa	Predicted RBP	7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	HSPA6	P17066	643 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	DALRD3	Q5D0E6	543 aa	Known RBP	7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	ARHGAP27	Q6ZUM4	889 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	TRIM46	Q7Z4K8	759 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	TTC5	Q8N0Z6	440 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	ITPKC	Q96DU7	683 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	KLF16	Q9BXK1	252 aa	Predicted RBP	7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	MIS18A	Q9NYP9	233 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	THSD7B	Q9C0I4	1608 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368		A0A1B0GUL6	1792 aa		7.36	□□□□□ -1.23
UBE3C-208	ENST00000497368	UBN2	Q6ZU65	1347 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	GPR37L1	O60883	481 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	HLF	Q16534	295 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	BICDL1	Q6ZP65	573 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	C2CD5	Q86YS7	1000 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	C7orf43	Q8WVR3	580 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	KCTD15	Q96SI1	283 aa	Predicted RBP	7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	RNF181	Q9P0P0	153 aa		7.35	□□□□□ -1.23
UBE3C-208	ENST00000497368	STARD3NL	O95772	234 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	SNRPB	P14678	240 aa	Known RBP	7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	EIF4A1	P60842	406 aa	Known RBP	7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	HTRA3	P83110	453 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	NFE2L2	Q16236	605 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	OLFM4	Q6UX06	510 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	TTLL7	Q6ZT98	887 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	DZIP3	Q86Y13	1208 aa	Known RBP	7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	DNAJC5G	Q8N7S2	189 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	CFAP53	Q96M91	514 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	NDUFB9	Q9Y6M9	179 aa		7.34	□□□□□ -1.23
UBE3C-208	ENST00000497368	PSME4	Q14997	1843 aa		7.34	□□□□□ -1.24
UBE3C-208	ENST00000497368	SPEF2	Q9C093	1822 aa		7.34	□□□□□ -1.24
UBE3C-208	ENST00000497368	IBTK	Q9P2D0	1353 aa	Predicted RBP	7.33	□□□□□ -1.24
UBE3C-208	ENST00000497368	LTBP3	Q9NS15	1303 aa		7.33	□□□□□ -1.24
UBE3C-208	ENST00000497368		A0A087WZG4	1122 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms