RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 ATP1A2P50993 1020 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 TBCELQ5QJ74 424 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 CCDC102BQ68D86 513 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 USP17L2Q6R6M4 530 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 TPCN2Q8NHX9 752 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 C7orf43Q8WVR3 580 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 COG3Q96JB2 828 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 SUV39H2Q9H5I1 410 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 NEUROD4Q9HD90 331 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 STRN4Q9NRL3 753 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 PRR12Q9ULL5 1215 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 STRCP1A6NGW2 1772 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 NKTRP30414 1462 aaKnown RBP6.33□□□□□ -1.4
CMSS1-209ENST00000497345 USP32Q8NFA0 1604 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 ADGRB2O60241 1585 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 CDC42BPGQ6DT37 1551 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 TTC21BQ7Z4L5 1316 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 SERTM1A2A2V5 107 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 GNB5O14775 395 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 EFSO43281 561 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 FOXO3O43524 673 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 ATP9BO43861 1147 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 PCBP4P57723 403 aaKnown RBP6.32□□□□□ -1.4
CMSS1-209ENST00000497345 CLDN10P78369 228 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 GRIN2CQ14957 1233 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 RRS1Q15050 365 aaKnown RBP6.32□□□□□ -1.4
CMSS1-209ENST00000497345 LRRC69Q6ZNQ3 347 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 CHSY3Q70JA7 882 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 CFAP53Q96M91 514 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 UCN2Q96RP3 112 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 ZNF232Q9UNY5 417 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 ADGRL3Q9HAR2 1447 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
CMSS1-209ENST00000497345 FMN2Q9NZ56 1722 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 DGKGP49619 791 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 ZNF468Q5VIY5 522 aaPredicted RBP6.31□□□□□ -1.4
CMSS1-209ENST00000497345 LARGE2Q8N3Y3 721 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 OGFOD1Q8N543 542 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 ABTB2Q8N961 1025 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 C19orf44Q9H6X5 657 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 MKRN1Q9UHC7 482 aaKnown RBP6.31□□□□□ -1.4
CMSS1-209ENST00000497345 GPC6Q9Y625 555 aaPredicted RBP6.31□□□□□ -1.4
CMSS1-209ENST00000497345 CPSF1Q10570 1443 aaKnown RBP6.31□□□□□ -1.4
CMSS1-209ENST00000497345 EDC4Q6P2E9 1401 aaKnown RBP6.31□□□□□ -1.4
CMSS1-209ENST00000497345 NPC1L1Q9UHC9 1359 aa6.31□□□□□ -1.4
CMSS1-209ENST00000497345 TOPAZ1Q8N9V7 1692 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 PALM3A6NDB9 673 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-209ENST00000497345 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-209ENST00000497345 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
CMSS1-209ENST00000497345 SH3PXD2AQ5TCZ1 1133 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 KRT28Q7Z3Y7 464 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 TSPAN10Q9H1Z9 355 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-209ENST00000497345 RRP7AQ9Y3A4 280 aaKnown RBP6.3□□□□□ -1.4
CMSS1-209ENST00000497345 AKAP12Q02952 1782 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 USP6P35125 1406 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 NWD1Q149M9 1564 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 MSH6P52701 1360 aa6.3□□□□□ -1.4
CMSS1-209ENST00000497345 M0R2N6 131 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 ADAM23O75077 832 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 MON2Q7Z3U7 1717 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 ANKARQ7Z5J8 1434 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 LTV1Q96GA3 475 aaPredicted RBP6.29□□□□□ -1.4
CMSS1-209ENST00000497345 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
CMSS1-209ENST00000497345 POLKQ9UBT6 870 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 HCN4Q9Y3Q4 1203 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 NSD2O96028 1365 aa6.29□□□□□ -1.4
CMSS1-209ENST00000497345 APAF1O14727 1248 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 DIAPH1O60610 1272 aaKnown RBP6.28□□□□□ -1.4
CMSS1-209ENST00000497345 DKK1O94907 266 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 HMOX1P09601 288 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 ALAS2P22557 587 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 PSMA6P60900 246 aaKnown RBP6.28□□□□□ -1.4
CMSS1-209ENST00000497345 SFSWAPQ12872 951 aaKnown RBP6.28□□□□□ -1.4
CMSS1-209ENST00000497345 SYT9Q86SS6 491 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 SIX5Q8N196 739 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 FNBP4Q8N3X1 1017 aaPredicted RBP6.28□□□□□ -1.4
CMSS1-209ENST00000497345 RHPN1Q8TCX5 695 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 CLUAP1Q96AJ1 413 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 CHMP3Q9Y3E7 222 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 C1orf167Q5SNV9 1468 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 ANKRD26Q9UPS8 1709 aa6.28□□□□□ -1.4
CMSS1-209ENST00000497345 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 ELOA3CA0A087WX78 387 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-209ENST00000497345 ELOA3DA6NLF2 546 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-209ENST00000497345 SFI1A8K8P3 1242 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 C1QTNF9BB2RNN3 333 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 BAG6P46379 1132 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 AMPHP49418 695 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 HIRAP54198 1017 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-209ENST00000497345 ELOA3BQ3SY89 546 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 POTEAQ6S8J7 498 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 ELOA3Q8NG57 546 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 ZNF594Q96JF6 807 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-209ENST00000497345 ANKIB1Q9P2G1 1089 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 TFIP11Q9UBB9 837 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms