RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 HDAC9Q9UKV0 1011 aa18.98■□□□□ 0.63
NEK4-206ENST00000496822 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
NEK4-206ENST00000496822 F8W031 263 aaPredicted RBP18.97■□□□□ 0.63
NEK4-206ENST00000496822 ZNF157P51786 506 aaPredicted RBP18.97■□□□□ 0.63
NEK4-206ENST00000496822 UBE4AQ14139 1066 aa18.97■□□□□ 0.63
NEK4-206ENST00000496822 NOB1Q9ULX3 412 aaKnown RBP18.97■□□□□ 0.63
NEK4-206ENST00000496822 MROH5Q6ZUA9 1318 aa18.97■□□□□ 0.63
NEK4-206ENST00000496822 SLC10A3P09131 477 aa18.96■□□□□ 0.63
NEK4-206ENST00000496822 CT47B1P0C2W7 299 aaPredicted RBP18.96■□□□□ 0.63
NEK4-206ENST00000496822 FAM84BQ96KN1 310 aaPredicted RBP18.96■□□□□ 0.63
NEK4-206ENST00000496822 AOX1Q06278 1338 aa18.96■□□□□ 0.63
NEK4-206ENST00000496822 MMP14P50281 582 aa18.95■□□□□ 0.62
NEK4-206ENST00000496822 METTL24Q5JXM2 366 aa18.95■□□□□ 0.62
NEK4-206ENST00000496822 RASAL3Q86YV0 1011 aa18.95■□□□□ 0.62
NEK4-206ENST00000496822 VGLL2Q8N8G2 317 aa18.95■□□□□ 0.62
NEK4-206ENST00000496822 TDRD7Q8NHU6 1098 aaKnown RBP18.95■□□□□ 0.62
NEK4-206ENST00000496822 FAM205AQ6ZU69 1335 aa18.95■□□□□ 0.62
NEK4-206ENST00000496822 HIBADHP31937 336 aaKnown RBP18.94■□□□□ 0.62
NEK4-206ENST00000496822 RFX5P48382 616 aaPredicted RBP18.94■□□□□ 0.62
NEK4-206ENST00000496822 RARSP54136 660 aaKnown RBP18.94■□□□□ 0.62
NEK4-206ENST00000496822 FKBP1AP62942 108 aaKnown RBP18.94■□□□□ 0.62
NEK4-206ENST00000496822 FKBP1BP68106 108 aa18.94■□□□□ 0.62
NEK4-206ENST00000496822 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
NEK4-206ENST00000496822 DLGAP5Q15398 846 aa18.94■□□□□ 0.62
NEK4-206ENST00000496822 DIEXFQ68CQ4 756 aaKnown RBP18.94■□□□□ 0.62
NEK4-206ENST00000496822 CCDC102AQ96A19 550 aa18.94■□□□□ 0.62
NEK4-206ENST00000496822 UBE2Q2LH0YL09 131 aa18.93■□□□□ 0.62
NEK4-206ENST00000496822 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
NEK4-206ENST00000496822 APOBEC3FQ8IUX4 373 aaKnown RBP18.93■□□□□ 0.62
NEK4-206ENST00000496822 MTMR14Q8NCE2 650 aa18.93■□□□□ 0.62
NEK4-206ENST00000496822 ARAP2Q8WZ64 1704 aa18.92■□□□□ 0.62
NEK4-206ENST00000496822 CA12O43570 354 aa18.92■□□□□ 0.62
NEK4-206ENST00000496822 PDE8BO95263 885 aa18.92■□□□□ 0.62
NEK4-206ENST00000496822 MFSD14BQ5SR56 506 aa18.92■□□□□ 0.62
NEK4-206ENST00000496822 API5Q9BZZ5 524 aaKnown RBP18.92■□□□□ 0.62
NEK4-206ENST00000496822 IQSEC3Q9UPP2 1182 aaPredicted RBP18.92■□□□□ 0.62
NEK4-206ENST00000496822 SSC5DA1L4H1 1573 aa18.91■□□□□ 0.62
NEK4-206ENST00000496822 CLRN2A0PK11 232 aa18.91■□□□□ 0.62
NEK4-206ENST00000496822 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
NEK4-206ENST00000496822 UBTFL1P0CB47 393 aaPredicted RBP18.91■□□□□ 0.62
NEK4-206ENST00000496822 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
NEK4-206ENST00000496822 PTPN12Q05209 780 aaKnown RBP18.91■□□□□ 0.62
NEK4-206ENST00000496822 FBXO33Q7Z6M2 555 aa18.91■□□□□ 0.62
NEK4-206ENST00000496822 MIER1Q8N108 512 aa18.91■□□□□ 0.62
NEK4-206ENST00000496822 PRMT6Q96LA8 375 aaPredicted RBP18.91■□□□□ 0.62
NEK4-206ENST00000496822 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
NEK4-206ENST00000496822 PRKG1Q13976 671 aa18.9■□□□□ 0.62
NEK4-206ENST00000496822 TTLL12Q14166 644 aaPredicted RBP18.9■□□□□ 0.62
NEK4-206ENST00000496822 GRIK5Q16478 980 aa18.9■□□□□ 0.62
NEK4-206ENST00000496822 FZD1Q9UP38 647 aa18.9■□□□□ 0.62
NEK4-206ENST00000496822 ECM29Q5VYK3 1845 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 EYA2O00167 538 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 FGFR2P21802 821 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 NF2P35240 595 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 MEIS3Q99687 375 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 DEFB129Q9H1M3 183 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 LRRFIP2Q9Y608 721 aaKnown RBP18.89■□□□□ 0.61
NEK4-206ENST00000496822 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
NEK4-206ENST00000496822 BCAMP50895 628 aa18.88■□□□□ 0.61
NEK4-206ENST00000496822 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
NEK4-206ENST00000496822 CHAF1AQ13111 956 aaPredicted RBP18.88■□□□□ 0.61
NEK4-206ENST00000496822 ATG9AQ7Z3C6 839 aa18.88■□□□□ 0.61
NEK4-206ENST00000496822 VPS37DQ86XT2 251 aa18.88■□□□□ 0.61
NEK4-206ENST00000496822 VEZTQ9HBM0 779 aa18.88■□□□□ 0.61
NEK4-206ENST00000496822 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
NEK4-206ENST00000496822 TNNQ9UQP3 1299 aa18.88■□□□□ 0.61
NEK4-206ENST00000496822 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
NEK4-206ENST00000496822 SIL1Q9H173 461 aa18.87■□□□□ 0.61
NEK4-206ENST00000496822 RNF186Q9NXI6 227 aa18.87■□□□□ 0.61
NEK4-206ENST00000496822 MYO1BO43795 1136 aa18.86■□□□□ 0.61
NEK4-206ENST00000496822 CAVIN4Q5BKX8 364 aa18.86■□□□□ 0.61
NEK4-206ENST00000496822 SAGE1Q9NXZ1 904 aa18.86■□□□□ 0.61
NEK4-206ENST00000496822 SERPINA10Q9UK55 444 aa18.86■□□□□ 0.61
NEK4-206ENST00000496822 TRPA1O75762 1119 aa18.85■□□□□ 0.61
NEK4-206ENST00000496822 BCAR3O75815 825 aa18.85■□□□□ 0.61
NEK4-206ENST00000496822 MKRN3Q13064 507 aaKnown RBP18.85■□□□□ 0.61
NEK4-206ENST00000496822 ARMC9Q7Z3E5 817 aa18.85■□□□□ 0.61
NEK4-206ENST00000496822 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
NEK4-206ENST00000496822 ABHD8Q96I13 439 aa18.85■□□□□ 0.61
NEK4-206ENST00000496822 ANGEL1Q9UNK9 670 aaKnown RBP18.85■□□□□ 0.61
NEK4-206ENST00000496822 PA2G4Q9UQ80 394 aaKnown RBP18.85■□□□□ 0.61
NEK4-206ENST00000496822 PPP2R3BQ9Y5P8 575 aa18.85■□□□□ 0.61
NEK4-206ENST00000496822 FRAT2O75474 233 aaPredicted RBP18.84■□□□□ 0.61
NEK4-206ENST00000496822 IFIT1P09914 478 aaKnown RBP18.84■□□□□ 0.61
NEK4-206ENST00000496822 TRIM27P14373 513 aa18.84■□□□□ 0.61
NEK4-206ENST00000496822 CRKP46108 304 aa18.84■□□□□ 0.61
NEK4-206ENST00000496822 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
NEK4-206ENST00000496822 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
NEK4-206ENST00000496822 LDLRAD1Q5T700 205 aa18.84■□□□□ 0.61
NEK4-206ENST00000496822 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
NEK4-206ENST00000496822 TDRD3Q9H7E2 651 aaKnown RBP18.84■□□□□ 0.61
NEK4-206ENST00000496822 ZNF70Q9UC06 446 aaPredicted RBP18.84■□□□□ 0.61
NEK4-206ENST00000496822 CIAO1O76071 339 aa18.83■□□□□ 0.6
NEK4-206ENST00000496822 SLC5A1P13866 664 aa18.83■□□□□ 0.6
NEK4-206ENST00000496822 RASA3Q14644 834 aa18.83■□□□□ 0.6
NEK4-206ENST00000496822 NBPF12Q5TAG4 269 aaPredicted RBP18.83■□□□□ 0.6
NEK4-206ENST00000496822 DZIP1LQ8IYY4 767 aaKnown RBP18.83■□□□□ 0.6
NEK4-206ENST00000496822 LPIN2Q92539 896 aa18.83■□□□□ 0.6
NEK4-206ENST00000496822 CASP8AP2Q9UKL3 1982 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms