RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 C1orf127Q8N9H9 656 aa7.29□□□□□ -1.24
CD46-218ENST00000496723 TMEM102Q8N9M5 508 aaPredicted RBP7.29□□□□□ -1.24
CD46-218ENST00000496723 GIMAP7Q8NHV1 300 aa7.29□□□□□ -1.24
CD46-218ENST00000496723 SHKBP1Q8TBC3 707 aa7.29□□□□□ -1.24
CD46-218ENST00000496723 SEPT3Q9UH03 358 aa7.29□□□□□ -1.24
CD46-218ENST00000496723 SOX13Q9UN79 622 aa7.29□□□□□ -1.24
CD46-218ENST00000496723 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
CD46-218ENST00000496723 MZF1P28698 734 aaPredicted RBP7.28□□□□□ -1.24
CD46-218ENST00000496723 NLRP12P59046 1061 aa7.28□□□□□ -1.24
CD46-218ENST00000496723 DNM1Q05193 864 aaKnown RBP7.28□□□□□ -1.24
CD46-218ENST00000496723 NOM1Q5C9Z4 860 aaKnown RBP7.28□□□□□ -1.24
CD46-218ENST00000496723 EDEM1Q92611 657 aa7.28□□□□□ -1.24
CD46-218ENST00000496723 GAS2O43903 313 aaKnown RBP7.27□□□□□ -1.25
CD46-218ENST00000496723 ADAMTS4O75173 837 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 PDGFAP04085 211 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 CPSF6Q16630 551 aaKnown RBP eCLIP7.27□□□□□ -1.25
CD46-218ENST00000496723 PHLDB3Q6NSJ2 640 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 BSNDQ8WZ55 320 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
CD46-218ENST00000496723 YBX3P16989 372 aaKnown RBP eCLIP7.26□□□□□ -1.25
CD46-218ENST00000496723 PDE4CQ08493 712 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 C8orf34Q49A92 452 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 NUTM2GQ5VZR2 741 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 ALKBH2Q6NS38 261 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 NXPE3Q969Y0 559 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 GGNBP2Q9H3C7 697 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 SOX17Q9H6I2 414 aaPredicted RBP7.26□□□□□ -1.25
CD46-218ENST00000496723 SUGCTQ9HAC7 445 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 PIM2Q9P1W9 311 aa7.26□□□□□ -1.25
CD46-218ENST00000496723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
CD46-218ENST00000496723 WDR64B1ANS9 1081 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 EDN3P14138 238 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 ACPPP15309 386 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 MAP4P27816 1152 aaKnown RBP7.25□□□□□ -1.25
CD46-218ENST00000496723 IKBKEQ14164 716 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 SMG8Q8ND04 991 aaKnown RBP7.25□□□□□ -1.25
CD46-218ENST00000496723 OSMRQ99650 979 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 TMPRSS13Q9BYE2 586 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 CHRDQ9H2X0 955 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 CYP4F12Q9HCS2 524 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 ATG3Q9NT62 314 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
CD46-218ENST00000496723 SOX1O00570 391 aaPredicted RBP7.24□□□□□ -1.25
CD46-218ENST00000496723 EHHADHQ08426 723 aa7.24□□□□□ -1.25
CD46-218ENST00000496723 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
CD46-218ENST00000496723 C12orf50Q8NA57 414 aaPredicted RBP7.24□□□□□ -1.25
CD46-218ENST00000496723 TIAF1O95411 115 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 USP5P45974 858 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 EIF1AXP47813 144 aaKnown RBP7.23□□□□□ -1.25
CD46-218ENST00000496723 VN1R5Q7Z5H4 357 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 MFSD14AQ96MC6 490 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 HHIPQ96QV1 700 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 ZKSCAN3Q9BRR0 538 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 MTMR7Q9Y216 660 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 LEMD3Q9Y2U8 911 aa7.23□□□□□ -1.25
CD46-218ENST00000496723 TRPA1O75762 1119 aa7.22□□□□□ -1.25
CD46-218ENST00000496723 EXOSC6Q5RKV6 272 aaKnown RBP7.22□□□□□ -1.25
CD46-218ENST00000496723 SNX29Q8TEQ0 813 aa7.22□□□□□ -1.25
CD46-218ENST00000496723 GTF3C2Q8WUA4 911 aaPredicted RBP7.22□□□□□ -1.25
CD46-218ENST00000496723 BHLHE41Q9C0J9 482 aaPredicted RBP7.22□□□□□ -1.25
CD46-218ENST00000496723 LOC100289279A0A1B0GTE1 492 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 PHACTR2O75167 634 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 TNFRSF21O75509 655 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 FOSL1P15407 271 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 NPR3P17342 541 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 MPSTP25325 297 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 RXRBP28702 533 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 SGO2Q562F6 1265 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 HGSNATQ68CP4 663 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 METTL22Q9BUU2 404 aaPredicted RBP7.21□□□□□ -1.26
CD46-218ENST00000496723 USP26Q9BXU7 913 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 ADGRE2Q9UHX3 823 aa7.21□□□□□ -1.26
CD46-218ENST00000496723 FAM95CA0A1B0GW59 222 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 A6NHS1 94 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 EREGO14944 169 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 ABL1P00519 1130 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
CD46-218ENST00000496723 USP11P51784 963 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 MTMR3Q13615 1198 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 PAOXQ6QHF9 649 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 OSBPL1AQ9BXW6 950 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 POLIQ9UNA4 740 aa7.2□□□□□ -1.26
CD46-218ENST00000496723 ANGEL1Q9UNK9 670 aaKnown RBP7.2□□□□□ -1.26
CD46-218ENST00000496723 FAM13AO94988 1023 aa7.19□□□□□ -1.26
CD46-218ENST00000496723 PRNPP04156 253 aa7.19□□□□□ -1.26
CD46-218ENST00000496723 F13BP05160 661 aa7.19□□□□□ -1.26
CD46-218ENST00000496723 ESRRAP11474 423 aaPredicted RBP7.19□□□□□ -1.26
CD46-218ENST00000496723 MSMPQ1L6U9 139 aa7.19□□□□□ -1.26
CD46-218ENST00000496723 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
CD46-218ENST00000496723 YIPF2Q9BWQ6 316 aa7.19□□□□□ -1.26
CD46-218ENST00000496723 AAMPQ13685 434 aa7.18□□□□□ -1.26
CD46-218ENST00000496723 ASAP3Q8TDY4 903 aa7.18□□□□□ -1.26
CD46-218ENST00000496723 FBXL18Q96ME1 805 aa7.18□□□□□ -1.26
CD46-218ENST00000496723 ANO2Q9NQ90 1003 aa7.18□□□□□ -1.26
CD46-218ENST00000496723 DLGAP3O95886 979 aa7.17□□□□□ -1.26
CD46-218ENST00000496723 SERPINB4P48594 390 aa7.17□□□□□ -1.26
CD46-218ENST00000496723 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
CD46-218ENST00000496723 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms