RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NOGQ13253 232 aa17.98■□□□□ 0.47
VTI1A-209ENST00000496445 TSKSQ9UJT2 592 aa17.98■□□□□ 0.47
VTI1A-209ENST00000496445 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
VTI1A-209ENST00000496445 CAPN15O75808 1086 aa17.97■□□□□ 0.47
VTI1A-209ENST00000496445 CT47B1P0C2W7 299 aaPredicted RBP17.97■□□□□ 0.47
VTI1A-209ENST00000496445 UBE4AQ14139 1066 aa17.97■□□□□ 0.47
VTI1A-209ENST00000496445 LRRC24Q50LG9 513 aa17.97■□□□□ 0.47
VTI1A-209ENST00000496445 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
VTI1A-209ENST00000496445 BEGAINQ9BUH8 593 aa17.97■□□□□ 0.47
VTI1A-209ENST00000496445 MROH5Q6ZUA9 1318 aa17.97■□□□□ 0.47
VTI1A-209ENST00000496445 AKAP11Q9UKA4 1901 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 MYH13Q9UKX3 1938 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 SLC10A3P09131 477 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
VTI1A-209ENST00000496445 VGLL2Q8N8G2 317 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 HDAC9Q9UKV0 1011 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 PCDHAC2Q9Y5I4 1007 aa17.96■□□□□ 0.47
VTI1A-209ENST00000496445 COL1A1P02452 1464 aaPredicted RBP17.95■□□□□ 0.46
VTI1A-209ENST00000496445 GYG1P46976 350 aa17.95■□□□□ 0.46
VTI1A-209ENST00000496445 ZNF157P51786 506 aaPredicted RBP17.95■□□□□ 0.46
VTI1A-209ENST00000496445 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
VTI1A-209ENST00000496445 NOB1Q9ULX3 412 aaKnown RBP17.95■□□□□ 0.46
VTI1A-209ENST00000496445 CASP8AP2Q9UKL3 1982 aa17.95■□□□□ 0.46
VTI1A-209ENST00000496445 AOX1Q06278 1338 aa17.95■□□□□ 0.46
VTI1A-209ENST00000496445 FAM205AQ6ZU69 1335 aa17.95■□□□□ 0.46
VTI1A-209ENST00000496445 F8W031 263 aaPredicted RBP17.94■□□□□ 0.46
VTI1A-209ENST00000496445 RFX5P48382 616 aaPredicted RBP17.94■□□□□ 0.46
VTI1A-209ENST00000496445 FKBP1BP68106 108 aa17.94■□□□□ 0.46
VTI1A-209ENST00000496445 RASAL3Q86YV0 1011 aa17.94■□□□□ 0.46
VTI1A-209ENST00000496445 MTMR14Q8NCE2 650 aa17.94■□□□□ 0.46
VTI1A-209ENST00000496445 TDRD7Q8NHU6 1098 aaKnown RBP17.94■□□□□ 0.46
VTI1A-209ENST00000496445 CCDC102AQ96A19 550 aa17.94■□□□□ 0.46
VTI1A-209ENST00000496445 FAM84BQ96KN1 310 aaPredicted RBP17.94■□□□□ 0.46
VTI1A-209ENST00000496445 SSC5DA1L4H1 1573 aa17.94■□□□□ 0.46
VTI1A-209ENST00000496445 CA12O43570 354 aa17.93■□□□□ 0.46
VTI1A-209ENST00000496445 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
VTI1A-209ENST00000496445 APOBEC3FQ8IUX4 373 aaKnown RBP17.93■□□□□ 0.46
VTI1A-209ENST00000496445 HIBADHP31937 336 aaKnown RBP17.92■□□□□ 0.46
VTI1A-209ENST00000496445 KIF23Q02241 960 aaPredicted RBP17.92■□□□□ 0.46
VTI1A-209ENST00000496445 DLGAP5Q15398 846 aa17.92■□□□□ 0.46
VTI1A-209ENST00000496445 CFAP100Q494V2 611 aa17.92■□□□□ 0.46
VTI1A-209ENST00000496445 METTL24Q5JXM2 366 aa17.92■□□□□ 0.46
VTI1A-209ENST00000496445 LAMB1P07942 1786 aa17.91■□□□□ 0.46
VTI1A-209ENST00000496445 OTOFQ9HC10 1997 aa17.91■□□□□ 0.46
VTI1A-209ENST00000496445 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
VTI1A-209ENST00000496445 PDE8BO95263 885 aa17.91■□□□□ 0.46
VTI1A-209ENST00000496445 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
VTI1A-209ENST00000496445 FBXO33Q7Z6M2 555 aa17.91■□□□□ 0.46
VTI1A-209ENST00000496445 UBE2Q2LH0YL09 131 aa17.9■□□□□ 0.46
VTI1A-209ENST00000496445 PTPN12Q05209 780 aaKnown RBP17.9■□□□□ 0.46
VTI1A-209ENST00000496445 MFSD14BQ5SR56 506 aa17.9■□□□□ 0.46
VTI1A-209ENST00000496445 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
VTI1A-209ENST00000496445 API5Q9BZZ5 524 aaKnown RBP17.9■□□□□ 0.46
VTI1A-209ENST00000496445 CLRN2A0PK11 232 aa17.89■□□□□ 0.45
VTI1A-209ENST00000496445 UBTFL1P0CB47 393 aaPredicted RBP17.89■□□□□ 0.45
VTI1A-209ENST00000496445 FGFR2P21802 821 aa17.89■□□□□ 0.45
VTI1A-209ENST00000496445 GRIK5Q16478 980 aa17.89■□□□□ 0.45
VTI1A-209ENST00000496445 IQSEC3Q9UPP2 1182 aaPredicted RBP17.89■□□□□ 0.45
VTI1A-209ENST00000496445 EYA2O00167 538 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 ATG9AQ7Z3C6 839 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 CSRNP1Q96S65 589 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 DEFB129Q9H1M3 183 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 SAGE1Q9NXZ1 904 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 FZD1Q9UP38 647 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
VTI1A-209ENST00000496445 NF2P35240 595 aa17.87■□□□□ 0.45
VTI1A-209ENST00000496445 TTLL12Q14166 644 aaPredicted RBP17.87■□□□□ 0.45
VTI1A-209ENST00000496445 PUM3Q15397 648 aaKnown RBP17.87■□□□□ 0.45
VTI1A-209ENST00000496445 MIER1Q8N108 512 aa17.87■□□□□ 0.45
VTI1A-209ENST00000496445 MEIS3Q99687 375 aa17.87■□□□□ 0.45
VTI1A-209ENST00000496445 TTF2Q9UNY4 1162 aaKnown RBP17.87■□□□□ 0.45
VTI1A-209ENST00000496445 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
VTI1A-209ENST00000496445 BCAMP50895 628 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 PRKG1Q13976 671 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 VEZTQ9HBM0 779 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 RNF186Q9NXI6 227 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 SERPINA10Q9UK55 444 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 PPP2R3BQ9Y5P8 575 aa17.86■□□□□ 0.45
VTI1A-209ENST00000496445 MYO1BO43795 1136 aa17.85■□□□□ 0.45
VTI1A-209ENST00000496445 RBM5P52756 815 aaKnown RBP eCLIP17.85■□□□□ 0.45
VTI1A-209ENST00000496445 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
VTI1A-209ENST00000496445 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
VTI1A-209ENST00000496445 CAVIN4Q5BKX8 364 aa17.85■□□□□ 0.45
VTI1A-209ENST00000496445 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
VTI1A-209ENST00000496445 ABHD8Q96I13 439 aa17.85■□□□□ 0.45
VTI1A-209ENST00000496445 TNNQ9UQP3 1299 aa17.85■□□□□ 0.45
VTI1A-209ENST00000496445 TRPA1O75762 1119 aa17.84■□□□□ 0.45
VTI1A-209ENST00000496445 LDLRAD1Q5T700 205 aa17.84■□□□□ 0.45
VTI1A-209ENST00000496445 INTS3Q68E01 1043 aaKnown RBP17.84■□□□□ 0.45
VTI1A-209ENST00000496445 SIL1Q9H173 461 aa17.84■□□□□ 0.45
VTI1A-209ENST00000496445 ANGEL1Q9UNK9 670 aaKnown RBP17.84■□□□□ 0.45
VTI1A-209ENST00000496445 BCAR3O75815 825 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 CIAO1O76071 339 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
VTI1A-209ENST00000496445 TRIM27P14373 513 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 CRKP46108 304 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 MAP3K11Q16584 847 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms