RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.03
ATG3-209ENST00000496423 MED23Q9ULK4 1368 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 CCL15-CCL14A0A0B4J2E2 113 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 TLR2O60603 784 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 FARP2O94887 1054 aaPredicted RBP15.26■□□□□ 0.03
ATG3-209ENST00000496423 GRK4P32298 578 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 BMP8BP34820 402 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 MTFR1Q15390 333 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 CCL15Q16663 113 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 SEC31BQ9NQW1 1179 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 PRDM6Q9NQX0 595 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
ATG3-209ENST00000496423 ATP5J2-PTCD1G3V325 749 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 USP2O75604 605 aaPredicted RBP15.25■□□□□ 0.03
ATG3-209ENST00000496423 CCL5P13501 91 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 GJA5P36382 358 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 UBE2Q1Q7Z7E8 422 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 MS4A4AQ96JQ5 239 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 MXD3Q9BW11 206 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 ELP3Q9H9T3 547 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
ATG3-209ENST00000496423 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
ATG3-209ENST00000496423 ZNF804BA4D1E1 1349 aa15.24■□□□□ 0.03
ATG3-209ENST00000496423 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
ATG3-209ENST00000496423 ZBTB38Q8NAP3 1195 aaPredicted RBP15.24■□□□□ 0.03
ATG3-209ENST00000496423 ZBED3Q96IU2 234 aaPredicted RBP15.24■□□□□ 0.03
ATG3-209ENST00000496423 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
ATG3-209ENST00000496423 PDE8AO60658 829 aa15.23■□□□□ 0.03
ATG3-209ENST00000496423 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
ATG3-209ENST00000496423 LRIT3Q3SXY7 679 aa15.23■□□□□ 0.03
ATG3-209ENST00000496423 MTMR14Q8NCE2 650 aa15.23■□□□□ 0.03
ATG3-209ENST00000496423 BRI3BPQ8WY22 251 aa15.23■□□□□ 0.03
ATG3-209ENST00000496423 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
ATG3-209ENST00000496423 ECM29Q5VYK3 1845 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 CETPP11597 493 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 TNFAIP1Q13829 316 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 NBPF12Q5TAG4 269 aaPredicted RBP15.22■□□□□ 0.03
ATG3-209ENST00000496423 Q7L0L9 218 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
ATG3-209ENST00000496423 VEZTQ9HBM0 779 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 CSADQ9Y600 493 aa15.22■□□□□ 0.03
ATG3-209ENST00000496423 FMNL1O95466 1100 aaPredicted RBP15.21■□□□□ 0.03
ATG3-209ENST00000496423 SGPL1O95470 568 aa15.21■□□□□ 0.03
ATG3-209ENST00000496423 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.03
ATG3-209ENST00000496423 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
ATG3-209ENST00000496423 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
ATG3-209ENST00000496423 LEMD3Q9Y2U8 911 aa15.21■□□□□ 0.03
ATG3-209ENST00000496423 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.02
ATG3-209ENST00000496423 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
ATG3-209ENST00000496423 PSMC4P43686 418 aa15.2■□□□□ 0.02
ATG3-209ENST00000496423 GTF2IP78347 998 aa15.2■□□□□ 0.02
ATG3-209ENST00000496423 FAM43AQ8N2R8 423 aa15.2■□□□□ 0.02
ATG3-209ENST00000496423 COL4A1P02462 1669 aa15.19■□□□□ 0.02
ATG3-209ENST00000496423 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
ATG3-209ENST00000496423 GDF15Q99988 308 aa15.19■□□□□ 0.02
ATG3-209ENST00000496423 BSDC1Q9NW68 430 aaPredicted RBP15.19■□□□□ 0.02
ATG3-209ENST00000496423 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
ATG3-209ENST00000496423 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
ATG3-209ENST00000496423 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 CLRN2A0PK11 232 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATG3-209ENST00000496423 RASA3Q14644 834 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 TDHQ8IZJ6 230 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 SYMPKQ92797 1274 aaKnown RBP15.18■□□□□ 0.02
ATG3-209ENST00000496423 HYPKQ9NX55 129 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 MINPP1Q9UNW1 487 aa15.18■□□□□ 0.02
ATG3-209ENST00000496423 OSBPP22059 807 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 BCAMP50895 628 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 NECAB2Q7Z6G3 386 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
ATG3-209ENST00000496423 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 RPTORQ8N122 1335 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
ATG3-209ENST00000496423 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
ATG3-209ENST00000496423 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 TNNI2P48788 182 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 HDGFL1Q5TGJ6 251 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 ANKRD2Q9GZV1 360 aa15.16■□□□□ 0.02
ATG3-209ENST00000496423 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
ATG3-209ENST00000496423 COL9A1P20849 921 aa15.15■□□□□ 0.02
ATG3-209ENST00000496423 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
ATG3-209ENST00000496423 KCNJ4P48050 445 aa15.15■□□□□ 0.02
ATG3-209ENST00000496423 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
ATG3-209ENST00000496423 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
ATG3-209ENST00000496423 C17orf99Q6UX52 265 aa15.15■□□□□ 0.02
ATG3-209ENST00000496423 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.15■□□□□ 0.02
ATG3-209ENST00000496423 BTBD19C9JJ37 291 aa15.14■□□□□ 0.01
ATG3-209ENST00000496423 IGHMBP2P38935 993 aaKnown RBP15.14■□□□□ 0.01
ATG3-209ENST00000496423 VGLL4Q14135 290 aa15.14■□□□□ 0.01
ATG3-209ENST00000496423 ERO1BQ86YB8 467 aa15.14■□□□□ 0.01
ATG3-209ENST00000496423 PRMT6Q96LA8 375 aaPredicted RBP15.14■□□□□ 0.01
ATG3-209ENST00000496423 UBE2OQ9C0C9 1292 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms