RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 SAGE1Q9NXZ1 904 aa13.79□□□□□ -0.2
RNF220-217ENST00000496262 CASP8AP2Q9UKL3 1982 aa13.79□□□□□ -0.2
RNF220-217ENST00000496262 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
RNF220-217ENST00000496262 CERS5Q8N5B7 392 aa13.78□□□□□ -0.2
RNF220-217ENST00000496262 FZD1Q9UP38 647 aa13.78□□□□□ -0.2
RNF220-217ENST00000496262 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
RNF220-217ENST00000496262 DLGAP5Q15398 846 aa13.77□□□□□ -0.21
RNF220-217ENST00000496262 APOBEC3FQ8IUX4 373 aaKnown RBP13.77□□□□□ -0.21
RNF220-217ENST00000496262 SRCIN1Q9C0H9 1055 aa13.77□□□□□ -0.21
RNF220-217ENST00000496262 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
RNF220-217ENST00000496262 CLRN2A0PK11 232 aa13.76□□□□□ -0.21
RNF220-217ENST00000496262 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
RNF220-217ENST00000496262 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.21
RNF220-217ENST00000496262 SUCLG2Q96I99 432 aa13.76□□□□□ -0.21
RNF220-217ENST00000496262 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
RNF220-217ENST00000496262 MLLT1Q03111 559 aaPredicted RBP13.75□□□□□ -0.21
RNF220-217ENST00000496262 PTPN12Q05209 780 aaKnown RBP13.75□□□□□ -0.21
RNF220-217ENST00000496262 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
RNF220-217ENST00000496262 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
RNF220-217ENST00000496262 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
RNF220-217ENST00000496262 A0A1B0GUL6 1792 aa13.75□□□□□ -0.21
RNF220-217ENST00000496262 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 IL1R1P14778 569 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 GYG1P46976 350 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 MMP14P50281 582 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 CFAP100Q494V2 611 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 C15orf52Q6ZUT6 534 aaKnown RBP13.74□□□□□ -0.21
RNF220-217ENST00000496262 ARMC9Q7Z3E5 817 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
RNF220-217ENST00000496262 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
RNF220-217ENST00000496262 DEFB129Q9H1M3 183 aa13.74□□□□□ -0.21
RNF220-217ENST00000496262 AOX1Q06278 1338 aa13.73□□□□□ -0.21
RNF220-217ENST00000496262 MYO1BO43795 1136 aa13.73□□□□□ -0.21
RNF220-217ENST00000496262 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
RNF220-217ENST00000496262 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
RNF220-217ENST00000496262 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
RNF220-217ENST00000496262 SOX10P56693 466 aa13.72□□□□□ -0.21
RNF220-217ENST00000496262 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
RNF220-217ENST00000496262 KAZALD1Q96I82 304 aa13.72□□□□□ -0.21
RNF220-217ENST00000496262 PRMT6Q96LA8 375 aaPredicted RBP13.72□□□□□ -0.21
RNF220-217ENST00000496262 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
RNF220-217ENST00000496262 AKAP11Q9UKA4 1901 aa13.72□□□□□ -0.21
RNF220-217ENST00000496262 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
RNF220-217ENST00000496262 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
RNF220-217ENST00000496262 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.21
RNF220-217ENST00000496262 CTU1Q7Z7A3 348 aaKnown RBP13.71□□□□□ -0.21
RNF220-217ENST00000496262 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
RNF220-217ENST00000496262 COL1A1P02452 1464 aaPredicted RBP13.71□□□□□ -0.21
RNF220-217ENST00000496262 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.22
RNF220-217ENST00000496262 SREBF2Q12772 1141 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
RNF220-217ENST00000496262 UBE4AQ14139 1066 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 MTMR14Q8NCE2 650 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 KLHDC4Q8TBB5 520 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
RNF220-217ENST00000496262 CLMNQ96JQ2 1002 aa13.7□□□□□ -0.22
RNF220-217ENST00000496262 TTF2Q9UNY4 1162 aaKnown RBP13.7□□□□□ -0.22
RNF220-217ENST00000496262 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
RNF220-217ENST00000496262 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
RNF220-217ENST00000496262 FRAT2O75474 233 aaPredicted RBP13.69□□□□□ -0.22
RNF220-217ENST00000496262 FKBP1AP62942 108 aaKnown RBP13.69□□□□□ -0.22
RNF220-217ENST00000496262 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
RNF220-217ENST00000496262 LDLRAD1Q5T700 205 aa13.69□□□□□ -0.22
RNF220-217ENST00000496262 NBPF12Q5TAG4 269 aaPredicted RBP13.69□□□□□ -0.22
RNF220-217ENST00000496262 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
RNF220-217ENST00000496262 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
RNF220-217ENST00000496262 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
RNF220-217ENST00000496262 SSH1Q8WYL5 1049 aa13.69□□□□□ -0.22
RNF220-217ENST00000496262 SLC10A4Q96EP9 437 aa13.69□□□□□ -0.22
RNF220-217ENST00000496262 FAM84BQ96KN1 310 aaPredicted RBP13.69□□□□□ -0.22
RNF220-217ENST00000496262 UTYO14607 1347 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 PTPRCP08575 1304 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 E9PSI1 815 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 TM4SF4P48230 202 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 RGS19P49795 217 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 RASA3Q14644 834 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 SUPT20HL1Q3ZLR7 823 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 R3HDMLQ9H3Y0 253 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
RNF220-217ENST00000496262 RIPOR2Q9Y4F9 1068 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 PPP2R3BQ9Y5P8 575 aa13.68□□□□□ -0.22
RNF220-217ENST00000496262 FAM205AQ6ZU69 1335 aa13.67□□□□□ -0.22
RNF220-217ENST00000496262 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
RNF220-217ENST00000496262 GPR25O00155 361 aa13.67□□□□□ -0.22
RNF220-217ENST00000496262 RABL6Q3YEC7 729 aaPredicted RBP13.67□□□□□ -0.22
RNF220-217ENST00000496262 ERICH6BQ5W0A0 696 aa13.67□□□□□ -0.22
RNF220-217ENST00000496262 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
RNF220-217ENST00000496262 WNK4Q96J92 1243 aa13.67□□□□□ -0.22
RNF220-217ENST00000496262 ZNF70Q9UC06 446 aaPredicted RBP13.67□□□□□ -0.22
RNF220-217ENST00000496262 CRKP46108 304 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
RNF220-217ENST00000496262 GRIK5Q16478 980 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 DZIP1LQ8IYY4 767 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms