RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 CHAF1AQ13111 956 aaPredicted RBP11.87□□□□□ -0.51
PRPF3-207ENST00000496202 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
PRPF3-207ENST00000496202 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 SEMA3EO15041 775 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
PRPF3-207ENST00000496202 PHKA1P46020 1223 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
PRPF3-207ENST00000496202 CCDC158Q5M9N0 1113 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 STRIP1Q5VSL9 837 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 CCDC102BQ68D86 513 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 RSBN1LQ6PCB5 846 aaPredicted RBP11.86□□□□□ -0.51
PRPF3-207ENST00000496202 TDRD7Q8NHU6 1098 aaKnown RBP11.86□□□□□ -0.51
PRPF3-207ENST00000496202 DBNDD2Q9BQY9 259 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 KCNQ5Q9NR82 932 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.86□□□□□ -0.51
PRPF3-207ENST00000496202 SCN4AP35499 1836 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 WDR90Q96KV7 1748 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
PRPF3-207ENST00000496202 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-207ENST00000496202 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
PRPF3-207ENST00000496202 UQCRFS1P1P0C7P4 283 aa11.85□□□□□ -0.51
PRPF3-207ENST00000496202 ZNF784Q8NCA9 323 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-207ENST00000496202 TBC1D22AQ8WUA7 517 aa11.85□□□□□ -0.51
PRPF3-207ENST00000496202 EAF2Q96CJ1 260 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-207ENST00000496202 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-207ENST00000496202 CCDC8Q9H0W5 538 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-207ENST00000496202 DENND2AQ9ULE3 1009 aa11.85□□□□□ -0.51
PRPF3-207ENST00000496202 JAG2Q9Y219 1238 aa11.85□□□□□ -0.51
PRPF3-207ENST00000496202 FAM205AQ6ZU69 1335 aa11.85□□□□□ -0.51
PRPF3-207ENST00000496202 H7C1D1 291 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-207ENST00000496202 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 C16orf71Q8IYS4 520 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-207ENST00000496202 AGBL3Q8NEM8 1001 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 TLR7Q9NYK1 1049 aaKnown RBP11.84□□□□□ -0.51
PRPF3-207ENST00000496202 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
PRPF3-207ENST00000496202 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
PRPF3-207ENST00000496202 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-207ENST00000496202 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.51
PRPF3-207ENST00000496202 RASGRF1Q13972 1273 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 MFSD14BQ5SR56 506 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 DPF2Q92785 391 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 GPRC5DQ9NZD1 345 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 HDAC9Q9UKV0 1011 aa11.83□□□□□ -0.52
PRPF3-207ENST00000496202 IGHDP01880 384 aa11.82□□□□□ -0.52
PRPF3-207ENST00000496202 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
PRPF3-207ENST00000496202 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
PRPF3-207ENST00000496202 SCNN1DP51172 638 aa11.82□□□□□ -0.52
PRPF3-207ENST00000496202 FKBP1AP62942 108 aaKnown RBP11.82□□□□□ -0.52
PRPF3-207ENST00000496202 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
PRPF3-207ENST00000496202 ZGPATQ8N5A5 531 aaKnown RBP11.82□□□□□ -0.52
PRPF3-207ENST00000496202 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
PRPF3-207ENST00000496202 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
PRPF3-207ENST00000496202 PDS5AQ29RF7 1337 aaKnown RBP11.82□□□□□ -0.52
PRPF3-207ENST00000496202 COL1A1P02452 1464 aaPredicted RBP11.82□□□□□ -0.52
PRPF3-207ENST00000496202 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
PRPF3-207ENST00000496202 EPHX2P34913 555 aa11.81□□□□□ -0.52
PRPF3-207ENST00000496202 EPS15P42566 896 aa11.81□□□□□ -0.52
PRPF3-207ENST00000496202 EAPPQ56P03 285 aaPredicted RBP11.81□□□□□ -0.52
PRPF3-207ENST00000496202 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
PRPF3-207ENST00000496202 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
PRPF3-207ENST00000496202 SPATA5Q8NB90 893 aa11.81□□□□□ -0.52
PRPF3-207ENST00000496202 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
PRPF3-207ENST00000496202 MAST3O60307 1309 aa11.81□□□□□ -0.52
PRPF3-207ENST00000496202 AKAP11Q9UKA4 1901 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 LDHBP07195 334 aaKnown RBP11.8□□□□□ -0.52
PRPF3-207ENST00000496202 MCAMP43121 646 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 MMP14P50281 582 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-207ENST00000496202 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-207ENST00000496202 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 ZNF512BQ96KM6 892 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-207ENST00000496202 GMLQ99445 158 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 TAF1DQ9H5J8 278 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-207ENST00000496202 SNRKQ9NRH2 765 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 HMG20BQ9P0W2 317 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 TTF2Q9UNY4 1162 aaKnown RBP11.8□□□□□ -0.52
PRPF3-207ENST00000496202 SUGT1Q9Y2Z0 365 aa11.8□□□□□ -0.52
PRPF3-207ENST00000496202 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 RBM5P52756 815 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRPF3-207ENST00000496202 SCARF1Q14162 830 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 KIF4BQ2VIQ3 1234 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 TBC1D10BQ4KMP7 808 aaPredicted RBP11.79□□□□□ -0.52
PRPF3-207ENST00000496202 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
PRPF3-207ENST00000496202 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 PI16Q6UXB8 463 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
PRPF3-207ENST00000496202 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms