RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 NOM1Q5C9Z4 860 aaKnown RBP9.37□□□□□ -0.91
CLTC-208ENST00000496076 PMEPA1Q969W9 287 aa9.37□□□□□ -0.91
CLTC-208ENST00000496076 MEGF11A6BM72 1044 aa9.36□□□□□ -0.91
CLTC-208ENST00000496076 PDGFAP04085 211 aa9.36□□□□□ -0.91
CLTC-208ENST00000496076 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
CLTC-208ENST00000496076 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
CLTC-208ENST00000496076 CHRDQ9H2X0 955 aa9.36□□□□□ -0.91
CLTC-208ENST00000496076 SOX1O00570 391 aaPredicted RBP9.35□□□□□ -0.91
CLTC-208ENST00000496076 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
CLTC-208ENST00000496076 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
CLTC-208ENST00000496076 MFSD14AQ96MC6 490 aa9.35□□□□□ -0.91
CLTC-208ENST00000496076 MAP4P27816 1152 aaKnown RBP9.34□□□□□ -0.91
CLTC-208ENST00000496076 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
CLTC-208ENST00000496076 NUTM2GQ5VZR2 741 aa9.34□□□□□ -0.91
CLTC-208ENST00000496076 BSNDQ8WZ55 320 aa9.34□□□□□ -0.91
CLTC-208ENST00000496076 OSMRQ99650 979 aa9.34□□□□□ -0.91
CLTC-208ENST00000496076 RNF114Q9Y508 228 aa9.34□□□□□ -0.91
CLTC-208ENST00000496076 HOXA10P31260 410 aaPredicted RBP9.33□□□□□ -0.92
CLTC-208ENST00000496076 EIF1AXP47813 144 aaKnown RBP9.33□□□□□ -0.92
CLTC-208ENST00000496076 IKBKEQ14164 716 aa9.33□□□□□ -0.92
CLTC-208ENST00000496076 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
CLTC-208ENST00000496076 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
CLTC-208ENST00000496076 MPSTP25325 297 aa9.32□□□□□ -0.92
CLTC-208ENST00000496076 RXRBP28702 533 aa9.32□□□□□ -0.92
CLTC-208ENST00000496076 VN1R5Q7Z5H4 357 aa9.32□□□□□ -0.92
CLTC-208ENST00000496076 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
CLTC-208ENST00000496076 PIM2Q9P1W9 311 aa9.32□□□□□ -0.92
CLTC-208ENST00000496076 EREGO14944 169 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 FBXL6Q8N531 539 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 GTF3C2Q8WUA4 911 aaPredicted RBP9.31□□□□□ -0.92
CLTC-208ENST00000496076 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 TMPRSS13Q9BYE2 586 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 ATG3Q9NT62 314 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 POLIQ9UNA4 740 aa9.31□□□□□ -0.92
CLTC-208ENST00000496076 SMG8Q8ND04 991 aaKnown RBP9.3□□□□□ -0.92
CLTC-208ENST00000496076 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
CLTC-208ENST00000496076 CYP4F12Q9HCS2 524 aa9.3□□□□□ -0.92
CLTC-208ENST00000496076 LEMD3Q9Y2U8 911 aa9.3□□□□□ -0.92
CLTC-208ENST00000496076 LOC100289279A0A1B0GTE1 492 aa9.29□□□□□ -0.92
CLTC-208ENST00000496076 F13BP05160 661 aa9.29□□□□□ -0.92
CLTC-208ENST00000496076 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.922e-10■□□□□ 9.1
CLTC-208ENST00000496076 ALKBH2Q6NS38 261 aa9.29□□□□□ -0.92
CLTC-208ENST00000496076 SUGCTQ9HAC7 445 aa9.29□□□□□ -0.92
CLTC-208ENST00000496076 ADGRE2Q9UHX3 823 aa9.29□□□□□ -0.92
CLTC-208ENST00000496076 PHACTR2O75167 634 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 TNFRSF21O75509 655 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 TIAF1O95411 115 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 DLGAP3O95886 979 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 EDN3P14138 238 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 DRD2P14416 443 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 AAMPQ13685 434 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 ASAP3Q8TDY4 903 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 OSBPL1AQ9BXW6 950 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 SERPINA10Q9UK55 444 aa9.28□□□□□ -0.92
CLTC-208ENST00000496076 FAM95CA0A1B0GW59 222 aa9.27□□□□□ -0.93
CLTC-208ENST00000496076 USP11P51784 963 aa9.27□□□□□ -0.93
CLTC-208ENST00000496076 MTMR3Q13615 1198 aa9.27□□□□□ -0.93
CLTC-208ENST00000496076 NFKBIBQ15653 356 aa9.27□□□□□ -0.93
CLTC-208ENST00000496076 EXOSC6Q5RKV6 272 aaKnown RBP9.27□□□□□ -0.93
CLTC-208ENST00000496076 SOX17Q9H6I2 414 aaPredicted RBP9.27□□□□□ -0.93
CLTC-208ENST00000496076 SHISA5Q8N114 240 aa9.26□□□□□ -0.93
CLTC-208ENST00000496076 FBLIM1Q8WUP2 373 aa9.26□□□□□ -0.93
CLTC-208ENST00000496076 FOXD3Q9UJU5 478 aaPredicted RBP9.26□□□□□ -0.93
CLTC-208ENST00000496076 ESRRAP11474 423 aaPredicted RBP9.25□□□□□ -0.93
CLTC-208ENST00000496076 FOSL1P15407 271 aa9.25□□□□□ -0.93
CLTC-208ENST00000496076 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
CLTC-208ENST00000496076 PAOXQ6QHF9 649 aa9.25□□□□□ -0.93
CLTC-208ENST00000496076 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
CLTC-208ENST00000496076 BHLHE41Q9C0J9 482 aaPredicted RBP9.25□□□□□ -0.93
CLTC-208ENST00000496076 ANGEL1Q9UNK9 670 aaKnown RBP9.25□□□□□ -0.93
CLTC-208ENST00000496076 KRTAP4-8A0A0G2JLE6 195 aa9.24□□□□□ -0.93
CLTC-208ENST00000496076 GSTM4Q03013 218 aa9.24□□□□□ -0.93
CLTC-208ENST00000496076 EHHADHQ08426 723 aa9.24□□□□□ -0.93
CLTC-208ENST00000496076 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
CLTC-208ENST00000496076 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
CLTC-208ENST00000496076 LATS2Q9NRM7 1088 aa9.24□□□□□ -0.93
CLTC-208ENST00000496076 SSFA2P28290 1259 aa9.23□□□□□ -0.93
CLTC-208ENST00000496076 CPSF6Q16630 551 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLTC-208ENST00000496076 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
CLTC-208ENST00000496076 C2CD4AQ8NCU7 369 aaPredicted RBP9.23□□□□□ -0.93
CLTC-208ENST00000496076 CCDC39Q9UFE4 941 aa9.23□□□□□ -0.93
CLTC-208ENST00000496076 NPR3P17342 541 aa9.22□□□□□ -0.93
CLTC-208ENST00000496076 USP5P45974 858 aa9.22□□□□□ -0.93
CLTC-208ENST00000496076 SOX4Q06945 474 aaPredicted RBP9.22□□□□□ -0.93
CLTC-208ENST00000496076 AMOTL2Q9Y2J4 779 aa9.22□□□□□ -0.93
CLTC-208ENST00000496076 METTL12A8MUP2 240 aa9.21□□□□□ -0.94
CLTC-208ENST00000496076 FAM13AO94988 1023 aa9.21□□□□□ -0.94
CLTC-208ENST00000496076 ADMP35318 185 aa9.21□□□□□ -0.94
CLTC-208ENST00000496076 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.94
CLTC-208ENST00000496076 METTL22Q9BUU2 404 aaPredicted RBP9.21□□□□□ -0.94
CLTC-208ENST00000496076 ZFYVE28Q9HCC9 887 aa9.2□□□□□ -0.94
CLTC-208ENST00000496076 PRKAG2Q9UGJ0 569 aa9.2□□□□□ -0.94
CLTC-208ENST00000496076 TMEM88BA6NKF7 163 aa9.19□□□□□ -0.94
CLTC-208ENST00000496076 CYP26A1O43174 497 aa9.19□□□□□ -0.94
CLTC-208ENST00000496076 FZD6O60353 706 aa9.19□□□□□ -0.94
CLTC-208ENST00000496076 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
CLTC-208ENST00000496076 PRNPP04156 253 aa9.19□□□□□ -0.94
CLTC-208ENST00000496076 ZAR1Q86SH2 424 aa9.19□□□□□ -0.94
CLTC-208ENST00000496076 EZH1Q92800 747 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms