RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GDF10P55107 478 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 SKOR1P84550 965 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 METTL16Q86W50 562 aaKnown RBP6.04□□□□□ -1.44
VPS52-222ENST00000495981 ABHD8Q96I13 439 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 FAM161BQ96MY7 647 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 SLC4A9Q96Q91 983 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 RRAGCQ9HB90 399 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 IL21Q9HBE4 155 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 WDR90Q96KV7 1748 aa6.04□□□□□ -1.44
VPS52-222ENST00000495981 TOGARAM1Q9Y4F4 1720 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 GPR182O15218 404 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 INHAP05111 366 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 EIF1AXP47813 144 aaKnown RBP6.03□□□□□ -1.44
VPS52-222ENST00000495981 RGS19P49795 217 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 SLC27A3Q5K4L6 730 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 COX20Q5RI15 118 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 C9orf131Q5VYM1 1079 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 CC2D2BQ6DHV5 1058 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 C16orf46Q6P387 395 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 NYAP1Q6ZVC0 841 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 SETDB2Q96T68 719 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 FAM129BQ96TA1 746 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 TMPRSS4Q9NRS4 437 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 KIF20BQ96Q89 1820 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 RGPD2P0DJD1 1756 aa6.03□□□□□ -1.44
VPS52-222ENST00000495981 TNRC18O15417 2968 aaPredicted RBP6.02□□□□□ -1.45
VPS52-222ENST00000495981 SCAMP3O14828 347 aaKnown RBP6.02□□□□□ -1.45
VPS52-222ENST00000495981 ZBTB39O15060 712 aa6.02□□□□□ -1.45
VPS52-222ENST00000495981 LILRA1O75019 489 aa6.02□□□□□ -1.45
VPS52-222ENST00000495981 PLA2G2CQ5R387 149 aa6.02□□□□□ -1.45
VPS52-222ENST00000495981 ARHGEF25Q86VW2 580 aa6.02□□□□□ -1.45
VPS52-222ENST00000495981 C2orf49Q9BVC5 232 aaPredicted RBP6.02□□□□□ -1.45
VPS52-222ENST00000495981 USP3Q9Y6I4 520 aa6.02□□□□□ -1.45
VPS52-222ENST00000495981 NSD2O96028 1365 aa6.02□□□□□ -1.45
VPS52-222ENST00000495981 C5P01031 1676 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 A0A0C4DFX4 3053 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 KCPQ6ZWJ8 1503 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 A0A0G2JLW4 131 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 NDUFB5O43674 189 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 ERCC5P28715 1186 aaPredicted RBP6.01□□□□□ -1.45
VPS52-222ENST00000495981 GRM5P41594 1212 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 MLLT1Q03111 559 aaPredicted RBP6.01□□□□□ -1.45
VPS52-222ENST00000495981 EHHADHQ08426 723 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 TBCELQ5QJ74 424 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 ARHGAP27Q6ZUM4 889 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 NLRP13Q86W25 1043 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 STAG2Q8N3U4 1231 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 PIK3R5Q8WYR1 880 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 CITED4Q96RK1 184 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 DUSP9Q99956 384 aaKnown RBP6.01□□□□□ -1.45
VPS52-222ENST00000495981 PRKD2Q9BZL6 878 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 CYLDQ9NQC7 956 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 PRDM10Q9NQV6 1147 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 SCHIP1Q9P0W5 487 aaPredicted RBP6.01□□□□□ -1.45
VPS52-222ENST00000495981 PARP2Q9UGN5 583 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 SERTAD1Q9UHV2 236 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 LRFN2Q9ULH4 789 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 PKD1L3Q7Z443 1732 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 ROCK2O75116 1388 aaKnown RBP6.01□□□□□ -1.45
VPS52-222ENST00000495981 USP31Q70CQ4 1352 aa6.01□□□□□ -1.45
VPS52-222ENST00000495981 EDC4Q6P2E9 1401 aaKnown RBP6□□□□□ -1.45
VPS52-222ENST00000495981 PPEF1O14829 653 aaPredicted RBP6□□□□□ -1.45
VPS52-222ENST00000495981 BACH1O14867 736 aa6□□□□□ -1.45
VPS52-222ENST00000495981 PRPF40AO75400 957 aaKnown RBP6□□□□□ -1.45
VPS52-222ENST00000495981 LDHBP07195 334 aaKnown RBP6□□□□□ -1.45
VPS52-222ENST00000495981 LBX1P52954 281 aa6□□□□□ -1.45
VPS52-222ENST00000495981 TRIM32Q13049 653 aa6□□□□□ -1.45
VPS52-222ENST00000495981 MTFR1Q15390 333 aa6□□□□□ -1.45
VPS52-222ENST00000495981 VASH1Q7L8A9 365 aaPredicted RBP6□□□□□ -1.45
VPS52-222ENST00000495981 TMC4Q7Z404 712 aa6□□□□□ -1.45
VPS52-222ENST00000495981 SLC9A9Q8IVB4 645 aa6□□□□□ -1.45
VPS52-222ENST00000495981 C16orf71Q8IYS4 520 aaPredicted RBP6□□□□□ -1.45
VPS52-222ENST00000495981 ALKBH8Q96BT7 664 aaKnown RBP6□□□□□ -1.45
VPS52-222ENST00000495981 CDK15Q96Q40 435 aa6□□□□□ -1.45
VPS52-222ENST00000495981 STIM2Q9P246 746 aa6□□□□□ -1.45
VPS52-222ENST00000495981 BRPF3Q9ULD4 1205 aa6□□□□□ -1.45
VPS52-222ENST00000495981 IQSEC3Q9UPP2 1182 aaPredicted RBP6□□□□□ -1.45
VPS52-222ENST00000495981 BCS1LQ9Y276 419 aa6□□□□□ -1.45
VPS52-222ENST00000495981 A0A1W2PP64 1363 aa6□□□□□ -1.45
VPS52-222ENST00000495981 CCDC7Q96M83 1385 aa6□□□□□ -1.45
VPS52-222ENST00000495981 TTC21BQ7Z4L5 1316 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 TTC21AQ8NDW8 1320 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 MEGF6O75095 1541 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 PDE4DIPQ5VU43 2346 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 CCDC85CA6NKD9 419 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 POTECB2RU33 542 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 PPP1R12BO60237 982 aaPredicted RBP5.99□□□□□ -1.45
VPS52-222ENST00000495981 HSP90B1P14625 803 aaKnown RBP5.99□□□□□ -1.45
VPS52-222ENST00000495981 VARSP26640 1264 aaKnown RBP5.99□□□□□ -1.45
VPS52-222ENST00000495981 DAB2P98082 770 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 FANCCQ00597 558 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 ZNF295-AS1Q8N0V1 137 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 SMC1BQ8NDV3 1235 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 UBXN4Q92575 508 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 DMRTB1Q96MA1 342 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 TINF2Q9BSI4 451 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 CFHR5Q9BXR6 569 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 CABP1Q9NZU7 370 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 CCNL1Q9UK58 526 aaPredicted RBP5.99□□□□□ -1.45
VPS52-222ENST00000495981 TAF1LQ8IZX4 1826 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 607 ms