RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CSF1RP07333 972 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 EN2P19622 333 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-209ENST00000495677 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 CRHR2Q13324 411 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 PI4KAP1Q8N8J0 262 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 C8orf58Q8NAV2 365 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 CD99L2Q8TCZ2 262 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
COL1A1-209ENST00000495677 IRS2Q9Y4H2 1338 aa17.28■□□□□ 0.36
COL1A1-209ENST00000495677 NEURL1BA8MQ27 555 aa17.28■□□□□ 0.36
COL1A1-209ENST00000495677 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-209ENST00000495677 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
COL1A1-209ENST00000495677 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
COL1A1-209ENST00000495677 PTPN18Q99952 460 aa17.28■□□□□ 0.36
COL1A1-209ENST00000495677 MYO1BO43795 1136 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 ITGA6P23229 1130 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 KLRK1P26718 216 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 ARHGEF6Q15052 776 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 CERS5Q8N5B7 392 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 MPHOSPH8Q99549 860 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 TMEM106CQ9BVX2 250 aa17.27■□□□□ 0.36
COL1A1-209ENST00000495677 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
COL1A1-209ENST00000495677 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
COL1A1-209ENST00000495677 IL1R1P14778 569 aa17.26■□□□□ 0.35
COL1A1-209ENST00000495677 GJA5P36382 358 aa17.26■□□□□ 0.35
COL1A1-209ENST00000495677 NBPF12Q5TAG4 269 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-209ENST00000495677 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
COL1A1-209ENST00000495677 ZNF333Q96JL9 665 aa17.26■□□□□ 0.35
COL1A1-209ENST00000495677 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-209ENST00000495677 CAP1Q01518 475 aa17.25■□□□□ 0.35
COL1A1-209ENST00000495677 CHRNDQ07001 517 aa17.25■□□□□ 0.35
COL1A1-209ENST00000495677 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
COL1A1-209ENST00000495677 CFAP100Q494V2 611 aa17.25■□□□□ 0.35
COL1A1-209ENST00000495677 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
COL1A1-209ENST00000495677 CEP290O15078 2479 aa17.25■□□□□ 0.35
COL1A1-209ENST00000495677 CASP7P55210 303 aa17.24■□□□□ 0.35
COL1A1-209ENST00000495677 UBE3BQ7Z3V4 1068 aa17.24■□□□□ 0.35
COL1A1-209ENST00000495677 KCNJ4P48050 445 aa17.23■□□□□ 0.35
COL1A1-209ENST00000495677 GCKRQ14397 625 aa17.23■□□□□ 0.35
COL1A1-209ENST00000495677 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-209ENST00000495677 PCDHAC2Q9Y5I4 1007 aa17.23■□□□□ 0.35
COL1A1-209ENST00000495677 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
COL1A1-209ENST00000495677 APAF1O14727 1248 aa17.22■□□□□ 0.35
COL1A1-209ENST00000495677 TNFAIP1Q13829 316 aa17.22■□□□□ 0.35
COL1A1-209ENST00000495677 RASA3Q14644 834 aa17.22■□□□□ 0.35
COL1A1-209ENST00000495677 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
COL1A1-209ENST00000495677 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
COL1A1-209ENST00000495677 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
COL1A1-209ENST00000495677 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
COL1A1-209ENST00000495677 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
COL1A1-209ENST00000495677 ZFYVE28Q9HCC9 887 aa17.21■□□□□ 0.35
COL1A1-209ENST00000495677 TRIOBPQ9H2D6 2365 aa17.21■□□□□ 0.34
COL1A1-209ENST00000495677 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
COL1A1-209ENST00000495677 SLC9C1Q4G0N8 1177 aa17.2■□□□□ 0.34
COL1A1-209ENST00000495677 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
COL1A1-209ENST00000495677 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
COL1A1-209ENST00000495677 FAM205AQ6ZU69 1335 aa17.2■□□□□ 0.34
COL1A1-209ENST00000495677 GTF2A2P52657 109 aa17.19■□□□□ 0.34
COL1A1-209ENST00000495677 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
COL1A1-209ENST00000495677 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-209ENST00000495677 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
COL1A1-209ENST00000495677 MYH16Q9H6N6 1097 aa17.19■□□□□ 0.34
COL1A1-209ENST00000495677 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
COL1A1-209ENST00000495677 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-209ENST00000495677 PTCH2Q9Y6C5 1203 aa17.19■□□□□ 0.34
COL1A1-209ENST00000495677 SZT2Q5T011 3432 aa17.19■□□□□ 0.34
COL1A1-209ENST00000495677 F8W031 263 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-209ENST00000495677 SNAP23O00161 211 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 TAF5LO75529 589 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 GNRH1P01148 92 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 TAF1CQ15572 869 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-209ENST00000495677 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 BRI3BPQ8WY22 251 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 ELP3Q9H9T3 547 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 SERPINA10Q9UK55 444 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 ZSWIM8A7E2V4 1837 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 AOX1Q06278 1338 aa17.18■□□□□ 0.34
COL1A1-209ENST00000495677 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
COL1A1-209ENST00000495677 PRMT2P55345 433 aa17.17■□□□□ 0.34
COL1A1-209ENST00000495677 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
COL1A1-209ENST00000495677 SLC4A8Q2Y0W8 1093 aa17.17■□□□□ 0.34
COL1A1-209ENST00000495677 G2E3Q7L622 706 aa17.17■□□□□ 0.34
COL1A1-209ENST00000495677 ZNF70Q9UC06 446 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-209ENST00000495677 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
COL1A1-209ENST00000495677 TLR2O60603 784 aa17.16■□□□□ 0.34
COL1A1-209ENST00000495677 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL1A1-209ENST00000495677 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
COL1A1-209ENST00000495677 CCL15Q16663 113 aa17.16■□□□□ 0.34
COL1A1-209ENST00000495677 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-209ENST00000495677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL1A1-209ENST00000495677 WDHD1O75717 1129 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-209ENST00000495677 FOXO4P98177 505 aa17.15■□□□□ 0.34
COL1A1-209ENST00000495677 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
COL1A1-209ENST00000495677 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
COL1A1-209ENST00000495677 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
COL1A1-209ENST00000495677 MGAMO43451 1857 aa17.15■□□□□ 0.34
COL1A1-209ENST00000495677 H0YGN5 161 aa17.14■□□□□ 0.33
COL1A1-209ENST00000495677 TNNI2P48788 182 aa17.14■□□□□ 0.33
COL1A1-209ENST00000495677 FLIIQ13045 1269 aa17.14■□□□□ 0.33
COL1A1-209ENST00000495677 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms