RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 EYA3Q99504 573 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 MCOLN1Q9GZU1 580 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 GNL3LQ9NVN8 582 aaKnown RBP17.86■□□□□ 0.45
PTPRE-211ENST00000495530 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 ZNF609O15014 1411 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 COL4A1P02462 1669 aa17.85■□□□□ 0.45
PTPRE-211ENST00000495530 UQCRFS1P1P0C7P4 283 aa17.85■□□□□ 0.45
PTPRE-211ENST00000495530 ATP5JP18859 108 aa17.85■□□□□ 0.45
PTPRE-211ENST00000495530 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
PTPRE-211ENST00000495530 PRPF38BQ5VTL8 546 aaKnown RBP17.85■□□□□ 0.45
PTPRE-211ENST00000495530 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
PTPRE-211ENST00000495530 TBC1D16Q8TBP0 767 aa17.85■□□□□ 0.45
PTPRE-211ENST00000495530 OTUD7AQ8TE49 926 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-211ENST00000495530 ZNF512BQ96KM6 892 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-211ENST00000495530 TAF1DQ9H5J8 278 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-211ENST00000495530 ZNF219Q9P2Y4 722 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-211ENST00000495530 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
PTPRE-211ENST00000495530 RTFDC1Q9BY42 306 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-211ENST00000495530 ZC3H12CQ9C0D7 883 aaKnown RBP17.84■□□□□ 0.45
PTPRE-211ENST00000495530 TLR7Q9NYK1 1049 aaKnown RBP17.84■□□□□ 0.45
PTPRE-211ENST00000495530 POLLQ9UGP5 575 aa17.84■□□□□ 0.45
PTPRE-211ENST00000495530 ABT1Q9ULW3 272 aaKnown RBP17.84■□□□□ 0.45
PTPRE-211ENST00000495530 LTBP3Q9NS15 1303 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 SNAP23O00161 211 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 ADORA1P30542 326 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.44
PTPRE-211ENST00000495530 CCDC102BQ68D86 513 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 ZNF804AQ7Z570 1209 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.44
PTPRE-211ENST00000495530 L3MBTL3Q96JM7 780 aaPredicted RBP17.83■□□□□ 0.44
PTPRE-211ENST00000495530 VPS33BQ9H267 617 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 SLX4Q8IY92 1834 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 LTBP1Q14766 1721 aa17.83■□□□□ 0.44
PTPRE-211ENST00000495530 ECE1P42892 770 aa17.82■□□□□ 0.44
PTPRE-211ENST00000495530 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
PTPRE-211ENST00000495530 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
PTPRE-211ENST00000495530 FBXO33Q7Z6M2 555 aa17.82■□□□□ 0.44
PTPRE-211ENST00000495530 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
PTPRE-211ENST00000495530 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
PTPRE-211ENST00000495530 PSMD1Q99460 953 aa17.82■□□□□ 0.44
PTPRE-211ENST00000495530 ZBTB22O15209 634 aa17.81■□□□□ 0.44
PTPRE-211ENST00000495530 BCAMP50895 628 aa17.81■□□□□ 0.44
PTPRE-211ENST00000495530 EAPPQ56P03 285 aaPredicted RBP17.81■□□□□ 0.44
PTPRE-211ENST00000495530 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
PTPRE-211ENST00000495530 PI4K2BQ8TCG2 481 aa17.81■□□□□ 0.44
PTPRE-211ENST00000495530 CACNA1SQ13698 1873 aa17.81■□□□□ 0.44
PTPRE-211ENST00000495530 MED23Q9ULK4 1368 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 TRPM7Q96QT4 1865 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-211ENST00000495530 G3V3G9 751 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 SEMA3EO15041 775 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-211ENST00000495530 ARID4AP29374 1257 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-211ENST00000495530 GYG1P46976 350 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 DCAF8Q5TAQ9 597 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 TAOK3Q9H2K8 898 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 CLEC11AQ9Y240 323 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 LRRC37AA6NMS7 1700 aa17.8■□□□□ 0.44
PTPRE-211ENST00000495530 CA12O43570 354 aa17.79■□□□□ 0.44
PTPRE-211ENST00000495530 PHKA1P46020 1223 aa17.79■□□□□ 0.44
PTPRE-211ENST00000495530 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPRE-211ENST00000495530 CAPNS2Q96L46 248 aa17.79■□□□□ 0.44
PTPRE-211ENST00000495530 GPR101Q96P66 508 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-211ENST00000495530 HAUS7Q99871 368 aa17.79■□□□□ 0.44
PTPRE-211ENST00000495530 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
PTPRE-211ENST00000495530 BOLA2Q9H3K6 86 aa17.79■□□□□ 0.44
PTPRE-211ENST00000495530 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
PTPRE-211ENST00000495530 RIMBP2O15034 1052 aa17.78■□□□□ 0.44
PTPRE-211ENST00000495530 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
PTPRE-211ENST00000495530 CNTROBQ8N137 903 aa17.78■□□□□ 0.44
PTPRE-211ENST00000495530 DENND2AQ9ULE3 1009 aa17.78■□□□□ 0.44
PTPRE-211ENST00000495530 IRS2Q9Y4H2 1338 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 DGKZQ13574 1117 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-211ENST00000495530 PAXIP1Q6ZW49 1069 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-211ENST00000495530 SLC51AQ86UW1 340 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-211ENST00000495530 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 TICAM2Q86XR7 235 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 EVI5LQ96CN4 794 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 TSKSQ9UJT2 592 aa17.77■□□□□ 0.44
PTPRE-211ENST00000495530 IL1R1P14778 569 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 KLRK1P26718 216 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 TDRD7Q8NHU6 1098 aaKnown RBP17.76■□□□□ 0.43
PTPRE-211ENST00000495530 DNAJC2Q99543 621 aaKnown RBP17.76■□□□□ 0.43
PTPRE-211ENST00000495530 CD209Q9NNX6 404 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 HACL1Q9UJ83 578 aa17.76■□□□□ 0.43
PTPRE-211ENST00000495530 PPIP5K2O43314 1243 aa17.75■□□□□ 0.43
PTPRE-211ENST00000495530 MAP2K2P36507 400 aa17.75■□□□□ 0.43
PTPRE-211ENST00000495530 MCAMP43121 646 aa17.75■□□□□ 0.43
PTPRE-211ENST00000495530 LRRFIP1Q32MZ4 808 aaKnown RBP17.75■□□□□ 0.43
PTPRE-211ENST00000495530 MAP1SQ66K74 1059 aaPredicted RBP17.75■□□□□ 0.43
PTPRE-211ENST00000495530 RILPL2Q969X0 211 aa17.75■□□□□ 0.43
PTPRE-211ENST00000495530 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
PTPRE-211ENST00000495530 HMG20BQ9P0W2 317 aa17.75■□□□□ 0.43
PTPRE-211ENST00000495530 A0A1B0GUL6 1792 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms