RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 DACT2Q5SW24 774 aa20.97■□□□□ 0.95
HDAC6-235ENST00000495515 TBC1D22AQ8WUA7 517 aa20.97■□□□□ 0.95
HDAC6-235ENST00000495515 BCL11AQ9H165 835 aa20.97■□□□□ 0.95
HDAC6-235ENST00000495515 DBNLQ9UJU6 430 aaKnown RBP20.97■□□□□ 0.95
HDAC6-235ENST00000495515 IQSEC3Q9UPP2 1182 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-235ENST00000495515 GMPSP49915 693 aaPredicted RBP20.96■□□□□ 0.95
HDAC6-235ENST00000495515 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
HDAC6-235ENST00000495515 DPF2Q92785 391 aa20.96■□□□□ 0.95
HDAC6-235ENST00000495515 IGHDP01880 384 aa20.95■□□□□ 0.94
HDAC6-235ENST00000495515 VEGFAP15692 232 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-235ENST00000495515 CHAF1AQ13111 956 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-235ENST00000495515 ANKRD45Q5TZF3 282 aa20.95■□□□□ 0.94
HDAC6-235ENST00000495515 ERICH6BQ5W0A0 696 aa20.95■□□□□ 0.94
HDAC6-235ENST00000495515 WDR66Q8TBY9 1149 aa20.95■□□□□ 0.94
HDAC6-235ENST00000495515 HACL1Q9UJ83 578 aa20.95■□□□□ 0.94
HDAC6-235ENST00000495515 ZBTB12Q9Y330 459 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-235ENST00000495515 SMARCA5O60264 1052 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-235ENST00000495515 ARID4AP29374 1257 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-235ENST00000495515 MMP14P50281 582 aa20.94■□□□□ 0.94
HDAC6-235ENST00000495515 MFSD14BQ5SR56 506 aa20.94■□□□□ 0.94
HDAC6-235ENST00000495515 ZNF512BQ96KM6 892 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-235ENST00000495515 H7C1D1 291 aa20.93■□□□□ 0.94
HDAC6-235ENST00000495515 OGFOD1Q8N543 542 aa20.93■□□□□ 0.94
HDAC6-235ENST00000495515 GPATCH3Q96I76 525 aa20.93■□□□□ 0.94
HDAC6-235ENST00000495515 RRAGCQ9HB90 399 aa20.93■□□□□ 0.94
HDAC6-235ENST00000495515 TLR7Q9NYK1 1049 aaKnown RBP20.93■□□□□ 0.94
HDAC6-235ENST00000495515 GPRC5DQ9NZD1 345 aa20.93■□□□□ 0.94
HDAC6-235ENST00000495515 JAG2Q9Y219 1238 aa20.93■□□□□ 0.94
HDAC6-235ENST00000495515 PDS5AQ29RF7 1337 aaKnown RBP20.93■□□□□ 0.94
HDAC6-235ENST00000495515 ARAP2Q8WZ64 1704 aa20.92■□□□□ 0.94
HDAC6-235ENST00000495515 SCNN1DP51172 638 aa20.92■□□□□ 0.94
HDAC6-235ENST00000495515 RASGRF1Q13972 1273 aa20.92■□□□□ 0.94
HDAC6-235ENST00000495515 ZGPATQ8N5A5 531 aaKnown RBP20.92■□□□□ 0.94
HDAC6-235ENST00000495515 CNOT7Q9UIV1 285 aaKnown RBP20.92■□□□□ 0.94
HDAC6-235ENST00000495515 HDAC9Q9UKV0 1011 aa20.92■□□□□ 0.94
HDAC6-235ENST00000495515 USP17L8P0C7I0 530 aa20.91■□□□□ 0.94
HDAC6-235ENST00000495515 MICALL2Q8IY33 904 aa20.91■□□□□ 0.94
HDAC6-235ENST00000495515 SPATA5Q8NB90 893 aa20.91■□□□□ 0.94
HDAC6-235ENST00000495515 GMLQ99445 158 aa20.91■□□□□ 0.94
HDAC6-235ENST00000495515 NMRK2Q9NPI5 230 aa20.91■□□□□ 0.94
HDAC6-235ENST00000495515 SUGT1Q9Y2Z0 365 aa20.91■□□□□ 0.94
HDAC6-235ENST00000495515 EPHX2P34913 555 aa20.9■□□□□ 0.94
HDAC6-235ENST00000495515 B4GALNT3Q6L9W6 998 aa20.9■□□□□ 0.94
HDAC6-235ENST00000495515 PNMA8AQ86V59 439 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-235ENST00000495515 MXD3Q9BW11 206 aa20.9■□□□□ 0.94
HDAC6-235ENST00000495515 ADARB2Q9NS39 739 aaKnown RBP20.9■□□□□ 0.94
HDAC6-235ENST00000495515 HMG20BQ9P0W2 317 aa20.9■□□□□ 0.94
HDAC6-235ENST00000495515 SCN9AQ15858 1988 aa20.9■□□□□ 0.94
HDAC6-235ENST00000495515 WDR90Q96KV7 1748 aa20.9■□□□□ 0.94
HDAC6-235ENST00000495515 SALL1Q9NSC2 1324 aa20.89■□□□□ 0.93
HDAC6-235ENST00000495515 KIAA0825Q8IV33 1275 aa20.89■□□□□ 0.93
HDAC6-235ENST00000495515 C16orf71Q8IYS4 520 aaPredicted RBP20.89■□□□□ 0.93
HDAC6-235ENST00000495515 CERS5Q8N5B7 392 aa20.89■□□□□ 0.93
HDAC6-235ENST00000495515 TAF1DQ9H5J8 278 aaPredicted RBP20.89■□□□□ 0.93
HDAC6-235ENST00000495515 MAST3O60307 1309 aa20.88■□□□□ 0.93
HDAC6-235ENST00000495515 POTECB2RU33 542 aa20.88■□□□□ 0.93
HDAC6-235ENST00000495515 EPS15P42566 896 aa20.88■□□□□ 0.93
HDAC6-235ENST00000495515 MCAMP43121 646 aa20.88■□□□□ 0.93
HDAC6-235ENST00000495515 SPTY2D1Q68D10 685 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-235ENST00000495515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.88■□□□□ 0.93
HDAC6-235ENST00000495515 CCDC136Q96JN2 1154 aa20.88■□□□□ 0.93
HDAC6-235ENST00000495515 ECHDC1Q9NTX5 307 aa20.88■□□□□ 0.93
HDAC6-235ENST00000495515 KIF3CO14782 793 aa20.87■□□□□ 0.93
HDAC6-235ENST00000495515 ZNF280AP59817 542 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-235ENST00000495515 NUCB1Q02818 461 aa20.87■□□□□ 0.93
HDAC6-235ENST00000495515 USP50Q70EL3 339 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-235ENST00000495515 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
HDAC6-235ENST00000495515 PSME4Q14997 1843 aa20.86■□□□□ 0.93
HDAC6-235ENST00000495515 F8W031 263 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-235ENST00000495515 LDHBP07195 334 aaKnown RBP20.86■□□□□ 0.93
HDAC6-235ENST00000495515 ATP5JP18859 108 aa20.86■□□□□ 0.93
HDAC6-235ENST00000495515 SCARF1Q14162 830 aa20.86■□□□□ 0.93
HDAC6-235ENST00000495515 LNPKQ9C0E8 428 aa20.86■□□□□ 0.93
HDAC6-235ENST00000495515 ABCF2Q9UG63 623 aa20.86■□□□□ 0.93
HDAC6-235ENST00000495515 TTF2Q9UNY4 1162 aaKnown RBP20.86■□□□□ 0.93
HDAC6-235ENST00000495515 COL1A1P02452 1464 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-235ENST00000495515 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
HDAC6-235ENST00000495515 ERC2O15083 957 aa20.85■□□□□ 0.93
HDAC6-235ENST00000495515 IGSF3O75054 1194 aa20.85■□□□□ 0.93
HDAC6-235ENST00000495515 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-235ENST00000495515 MYOZ2Q9NPC6 264 aa20.85■□□□□ 0.93
HDAC6-235ENST00000495515 SNRKQ9NRH2 765 aa20.85■□□□□ 0.93
HDAC6-235ENST00000495515 SCN4AP35499 1836 aa20.84■□□□□ 0.93
HDAC6-235ENST00000495515 MX1P20591 662 aa20.84■□□□□ 0.93
HDAC6-235ENST00000495515 HDLBPQ00341 1268 aaKnown RBP20.84■□□□□ 0.93
HDAC6-235ENST00000495515 EAPPQ56P03 285 aaPredicted RBP20.84■□□□□ 0.93
HDAC6-235ENST00000495515 PI16Q6UXB8 463 aa20.84■□□□□ 0.93
HDAC6-235ENST00000495515 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
HDAC6-235ENST00000495515 ZAP70P43403 619 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 TTF1Q15361 905 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-235ENST00000495515 KIF4BQ2VIQ3 1234 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 TBC1D10BQ4KMP7 808 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-235ENST00000495515 RBM26Q5T8P6 1007 aaKnown RBP20.83■□□□□ 0.93
HDAC6-235ENST00000495515 SAMD7Q7Z3H4 446 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 SLF2Q8IX21 1173 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 MRIQ9BWK5 157 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 BOLA2Q9H3K6 86 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 LRP2BPQ9P2M1 347 aa20.83■□□□□ 0.93
HDAC6-235ENST00000495515 SERPINA10Q9UK55 444 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms