RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 BRPF1P55201 1214 aaPredicted RBP13.33□□□□□ -0.28
NELFE-213ENST00000494956 HUNKP57058 714 aa13.33□□□□□ -0.28
NELFE-213ENST00000494956 METTL24Q5JXM2 366 aa13.33□□□□□ -0.28
NELFE-213ENST00000494956 MOB2Q70IA6 237 aa13.33□□□□□ -0.28
NELFE-213ENST00000494956 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
NELFE-213ENST00000494956 MEIS3Q99687 375 aa13.33□□□□□ -0.28
NELFE-213ENST00000494956 TSKSQ9UJT2 592 aa13.33□□□□□ -0.28
NELFE-213ENST00000494956 MYO3BQ8WXR4 1341 aa13.33□□□□□ -0.28
NELFE-213ENST00000494956 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
NELFE-213ENST00000494956 UBE4AQ14139 1066 aa13.32□□□□□ -0.28
NELFE-213ENST00000494956 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
NELFE-213ENST00000494956 VGLL2Q8N8G2 317 aa13.32□□□□□ -0.28
NELFE-213ENST00000494956 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
NELFE-213ENST00000494956 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
NELFE-213ENST00000494956 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
NELFE-213ENST00000494956 MROH5Q6ZUA9 1318 aa13.32□□□□□ -0.28
NELFE-213ENST00000494956 ECE1P42892 770 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 LBX1P52954 281 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 PTPN12Q05209 780 aaKnown RBP13.31□□□□□ -0.28
NELFE-213ENST00000494956 GRIK5Q16478 980 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
NELFE-213ENST00000494956 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 ZBED3Q96IU2 234 aaPredicted RBP13.31□□□□□ -0.28
NELFE-213ENST00000494956 SIL1Q9H173 461 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 PA2G4Q9UQ80 394 aaKnown RBP13.31□□□□□ -0.28
NELFE-213ENST00000494956 ECM29Q5VYK3 1845 aa13.31□□□□□ -0.28
NELFE-213ENST00000494956 PDE8BO95263 885 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 HSPA8P11142 646 aaKnown RBP13.3□□□□□ -0.28
NELFE-213ENST00000494956 TRIM27P14373 513 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 HIBADHP31937 336 aaKnown RBP13.3□□□□□ -0.28
NELFE-213ENST00000494956 ATG9AQ7Z3C6 839 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 HDAC9Q9UKV0 1011 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 FZD1Q9UP38 647 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
NELFE-213ENST00000494956 CLRN2A0PK11 232 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 FAM155AB1AL88 458 aaPredicted RBP13.29□□□□□ -0.28
NELFE-213ENST00000494956 EYA2O00167 538 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 BCAMP50895 628 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
NELFE-213ENST00000494956 CHAF1AQ13111 956 aaPredicted RBP13.29□□□□□ -0.28
NELFE-213ENST00000494956 PRKG1Q13976 671 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 CFAP100Q494V2 611 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 FBXO33Q7Z6M2 555 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 TNS4Q8IZW8 715 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 PRMT6Q96LA8 375 aaPredicted RBP13.29□□□□□ -0.28
NELFE-213ENST00000494956 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
NELFE-213ENST00000494956 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
NELFE-213ENST00000494956 CAPN15O75808 1086 aa13.28□□□□□ -0.28
NELFE-213ENST00000494956 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
NELFE-213ENST00000494956 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
NELFE-213ENST00000494956 MFSD14BQ5SR56 506 aa13.28□□□□□ -0.28
NELFE-213ENST00000494956 INTS3Q68E01 1043 aaKnown RBP13.28□□□□□ -0.28
NELFE-213ENST00000494956 MYH13Q9UKX3 1938 aa13.28□□□□□ -0.28
NELFE-213ENST00000494956 FAM205AQ6ZU69 1335 aa13.28□□□□□ -0.28
NELFE-213ENST00000494956 PAPPA2Q9BXP8 1791 aa13.27□□□□□ -0.28
NELFE-213ENST00000494956 FGFR2P21802 821 aa13.27□□□□□ -0.29
NELFE-213ENST00000494956 ZNF157P51786 506 aaPredicted RBP13.27□□□□□ -0.29
NELFE-213ENST00000494956 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.29
NELFE-213ENST00000494956 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.29
NELFE-213ENST00000494956 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.29
NELFE-213ENST00000494956 VPS37DQ86XT2 251 aa13.27□□□□□ -0.29
NELFE-213ENST00000494956 ARHGAP45Q92619 1136 aa13.27□□□□□ -0.29
NELFE-213ENST00000494956 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
NELFE-213ENST00000494956 MAP2K2P36507 400 aa13.26□□□□□ -0.29
NELFE-213ENST00000494956 FKBP1AP62942 108 aaKnown RBP13.26□□□□□ -0.29
NELFE-213ENST00000494956 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
NELFE-213ENST00000494956 PUM3Q15397 648 aaKnown RBP13.26□□□□□ -0.29
NELFE-213ENST00000494956 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
NELFE-213ENST00000494956 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
NELFE-213ENST00000494956 TTF2Q9UNY4 1162 aaKnown RBP13.26□□□□□ -0.29
NELFE-213ENST00000494956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
NELFE-213ENST00000494956 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
NELFE-213ENST00000494956 COL1A1P02452 1464 aaPredicted RBP13.25□□□□□ -0.29
NELFE-213ENST00000494956 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
NELFE-213ENST00000494956 FRAT2O75474 233 aaPredicted RBP13.25□□□□□ -0.29
NELFE-213ENST00000494956 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
NELFE-213ENST00000494956 KIF23Q02241 960 aaPredicted RBP13.25□□□□□ -0.29
NELFE-213ENST00000494956 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
NELFE-213ENST00000494956 RASAL3Q86YV0 1011 aa13.25□□□□□ -0.29
NELFE-213ENST00000494956 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
NELFE-213ENST00000494956 TDRD3Q9H7E2 651 aaKnown RBP13.25□□□□□ -0.29
NELFE-213ENST00000494956 SSC5DA1L4H1 1573 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 IPO8O15397 1037 aaKnown RBP13.24□□□□□ -0.29
NELFE-213ENST00000494956 SLC10A3P09131 477 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 IFIT1P09914 478 aaKnown RBP13.24□□□□□ -0.29
NELFE-213ENST00000494956 ADORA1P30542 326 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 MKRN3Q13064 507 aaKnown RBP13.24□□□□□ -0.29
NELFE-213ENST00000494956 NOGQ13253 232 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 APOBEC3FQ8IUX4 373 aaKnown RBP13.24□□□□□ -0.29
NELFE-213ENST00000494956 MTMR14Q8NCE2 650 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 DEFB129Q9H1M3 183 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 PRDM10Q9NQV6 1147 aa13.24□□□□□ -0.29
NELFE-213ENST00000494956 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 SRGAP3O43295 1099 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms