RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 AP5Z1O43299 807 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 EPB41L2O43491 1005 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 AP1G2O75843 785 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 CCDC192P0DO97 292 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 GSPT1P15170 499 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 LIG1P18858 919 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ACTN2P35609 894 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 RFC5P40937 340 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 SSR1P43307 286 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 GYS2P54840 703 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ANAPC15P60006 121 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 MAP2K1Q02750 393 aaPredicted RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 DHX8Q14562 1220 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 ZKSCAN8Q15776 578 aaPredicted RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 TPD52L1Q16890 204 aaPredicted RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 Q3C1V9 767 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ALDH1L2Q3SY69 923 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 CCDC158Q5M9N0 1113 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ZSCAN25Q6NSZ9 544 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 SARM1Q6SZW1 724 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 CASC1Q6TDU7 716 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 TMCO3Q6UWJ1 677 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 NBPF11Q86T75 865 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 AFAP1Q8N556 730 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 TMEM57Q8N5G2 664 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ANKRD20A12PQ8NF67 263 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 TBC1D22AQ8WUA7 517 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 STAG1Q8WVM7 1258 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 RTF1Q92541 710 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 GTF3C6Q969F1 213 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ZNF428Q96B54 188 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 TRERF1Q96PN7 1200 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 PLCD4Q9BRC7 762 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 FAM107BQ9H098 131 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 TMX1Q9H3N1 280 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 SNRKQ9NRH2 765 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 SUFUQ9UMX1 484 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 CD163L1Q9NR16 1453 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 A0A1B0GUL6 1792 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 SIPA1L3O60292 1781 aaPredicted RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 AGLP35573 1532 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 SLX4Q8IY92 1834 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 TTC36A6NLP5 189 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 TMCO5BA8MYB1 307 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 TNFRSF10AO00220 468 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 GOLIM4O00461 696 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 CCP110O43303 1012 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 GPR37L1O60883 481 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 CAVIN2O95810 425 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 F12P00748 615 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 TPM1P09493 284 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 USP17L8P0C7I0 530 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 ZNF853P0CG23 659 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 MAP2K2P36507 400 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 SLC19A1P41440 591 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 ZNF75DP51815 510 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 CORO7P57737 925 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 IRX1P78414 480 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 NAA30Q147X3 362 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 NR6A1Q15406 480 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 PTPN14Q15678 1187 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 ZRSR1Q15695 479 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 MAP9Q49MG5 647 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 NBPF6Q5VWK0 638 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 PPP2R2DQ66LE6 453 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 TMED8Q6PL24 325 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 LYPD8Q6UX82 237 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 RBM43Q6ZSC3 357 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 TADA2BQ86TJ2 420 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 NBPF5PQ86XG9 351 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 ERC1Q8IUD2 1116 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 REXO1L1PQ8IX06 675 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 ANKLE1Q8NAG6 615 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 SPC24Q8NBT2 197 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 MRFAP1L1Q96HT8 127 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 NBPF4Q96M43 638 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 DRC1Q96MC2 740 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 PCMTD1Q96MG8 357 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 NUDT12Q9BQG2 462 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 UTP14AQ9BVJ6 771 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 BCL2L13Q9BXK5 485 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 SRRTQ9BXP5 876 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 A1CFQ9NQ94 594 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 ORC3Q9UBD5 711 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 MKRN1Q9UHC7 482 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 DNAI1Q9UI46 699 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 LCMT1Q9UIC8 334 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 CCDC9Q9Y3X0 531 aaKnown RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 ATP6V1DQ9Y5K8 247 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 NEO1Q92859 1461 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 NWD1Q149M9 1564 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 PLCH1Q4KWH8 1693 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 NPHP3Q7Z494 1330 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 TTC21AQ8NDW8 1320 aa3.19□□□□□ -1.9
MDC1-208ENST00000494654 ZNF644Q9H582 1327 aaPredicted RBP3.19□□□□□ -1.9
MDC1-208ENST00000494654 A0A087WUV0 522 aaPredicted RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 EIF3CLB5ME19 914 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 U2SURPO15042 1029 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 ERC2O15083 957 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms