RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZNF804AQ7Z570 1209 aa12.08□□□□□ -0.48
MSH5-218ENST00000494646 CERS5Q8N5B7 392 aa12.08□□□□□ -0.48
MSH5-218ENST00000494646 ANKRD44Q8N8A2 993 aa12.08□□□□□ -0.48
MSH5-218ENST00000494646 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
MSH5-218ENST00000494646 UBE2Q2LH0YL09 131 aa12.07□□□□□ -0.48
MSH5-218ENST00000494646 ZNF609O15014 1411 aa12.07□□□□□ -0.48
MSH5-218ENST00000494646 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
MSH5-218ENST00000494646 IL1R1P14778 569 aa12.07□□□□□ -0.48
MSH5-218ENST00000494646 GYG1P46976 350 aa12.07□□□□□ -0.48
MSH5-218ENST00000494646 PRKG1Q13976 671 aa12.07□□□□□ -0.48
MSH5-218ENST00000494646 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
MSH5-218ENST00000494646 AKAP11Q9UKA4 1901 aa12.06□□□□□ -0.48
MSH5-218ENST00000494646 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 UBE4AQ14139 1066 aa12.06□□□□□ -0.48
MSH5-218ENST00000494646 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 RABL6Q3YEC7 729 aaPredicted RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
MSH5-218ENST00000494646 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
MSH5-218ENST00000494646 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
MSH5-218ENST00000494646 RBM5P52756 815 aaKnown RBP eCLIP12.05□□□□□ -0.48
MSH5-218ENST00000494646 NOGQ13253 232 aa12.05□□□□□ -0.48
MSH5-218ENST00000494646 DLGAP5Q15398 846 aa12.05□□□□□ -0.48
MSH5-218ENST00000494646 METTL24Q5JXM2 366 aa12.05□□□□□ -0.48
MSH5-218ENST00000494646 MIER1Q8N108 512 aa12.05□□□□□ -0.48
MSH5-218ENST00000494646 PRMT6Q96LA8 375 aaPredicted RBP12.05□□□□□ -0.48
MSH5-218ENST00000494646 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
MSH5-218ENST00000494646 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
MSH5-218ENST00000494646 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
MSH5-218ENST00000494646 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
MSH5-218ENST00000494646 TDRD7Q8NHU6 1098 aaKnown RBP12.04□□□□□ -0.48
MSH5-218ENST00000494646 ZBED3Q96IU2 234 aaPredicted RBP12.04□□□□□ -0.48
MSH5-218ENST00000494646 CSRNP1Q96S65 589 aa12.04□□□□□ -0.48
MSH5-218ENST00000494646 FZD1Q9UP38 647 aa12.04□□□□□ -0.48
MSH5-218ENST00000494646 MROH5Q6ZUA9 1318 aa12.04□□□□□ -0.48
MSH5-218ENST00000494646 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
MSH5-218ENST00000494646 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
MSH5-218ENST00000494646 PDE8BO95263 885 aa12.03□□□□□ -0.48
MSH5-218ENST00000494646 MMP14P50281 582 aa12.03□□□□□ -0.48
MSH5-218ENST00000494646 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
MSH5-218ENST00000494646 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
MSH5-218ENST00000494646 VPS37DQ86XT2 251 aa12.03□□□□□ -0.48
MSH5-218ENST00000494646 ECM29Q5VYK3 1845 aa12.02□□□□□ -0.48
MSH5-218ENST00000494646 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 TRPA1O75762 1119 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 SLC10A3P09131 477 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 CT47B1P0C2W7 299 aaPredicted RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 NF2P35240 595 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 BCAMP50895 628 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 GRIK5Q16478 980 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 MFSD14BQ5SR56 506 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 FBXO33Q7Z6M2 555 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 APOBEC3FQ8IUX4 373 aaKnown RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 VEZTQ9HBM0 779 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 TTF2Q9UNY4 1162 aaKnown RBP12.02□□□□□ -0.49
MSH5-218ENST00000494646 AOX1Q06278 1338 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 FAM205AQ6ZU69 1335 aa12.02□□□□□ -0.49
MSH5-218ENST00000494646 FKBP1BP68106 108 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
MSH5-218ENST00000494646 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
MSH5-218ENST00000494646 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
MSH5-218ENST00000494646 RASAL3Q86YV0 1011 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 VGLL2Q8N8G2 317 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 MTMR14Q8NCE2 650 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 SIL1Q9H173 461 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 RNF186Q9NXI6 227 aa12.01□□□□□ -0.49
MSH5-218ENST00000494646 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
MSH5-218ENST00000494646 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
MSH5-218ENST00000494646 EYA2O00167 538 aa12□□□□□ -0.49
MSH5-218ENST00000494646 CA12O43570 354 aa12□□□□□ -0.49
MSH5-218ENST00000494646 MYO1BO43795 1136 aa12□□□□□ -0.49
MSH5-218ENST00000494646 BCAR3O75815 825 aa12□□□□□ -0.49
MSH5-218ENST00000494646 SPDYE6P0CI01 402 aa12□□□□□ -0.49
MSH5-218ENST00000494646 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
MSH5-218ENST00000494646 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
MSH5-218ENST00000494646 TNNQ9UQP3 1299 aa12□□□□□ -0.49
MSH5-218ENST00000494646 LRRFIP2Q9Y608 721 aaKnown RBP12□□□□□ -0.49
MSH5-218ENST00000494646 PAPPA2Q9BXP8 1791 aa12□□□□□ -0.49
MSH5-218ENST00000494646 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
MSH5-218ENST00000494646 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
MSH5-218ENST00000494646 NBPF12Q5TAG4 269 aaPredicted RBP11.99□□□□□ -0.49
MSH5-218ENST00000494646 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
MSH5-218ENST00000494646 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
MSH5-218ENST00000494646 ABHD8Q96I13 439 aa11.99□□□□□ -0.49
MSH5-218ENST00000494646 MEIS3Q99687 375 aa11.99□□□□□ -0.49
MSH5-218ENST00000494646 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
MSH5-218ENST00000494646 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
MSH5-218ENST00000494646 MYH13Q9UKX3 1938 aa11.98□□□□□ -0.49
MSH5-218ENST00000494646 FGFR2P21802 821 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms