RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNRF3Q9ULT6 936 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 CHMP3Q9Y3E7 222 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 SCNN1DP51172 638 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 C1QTNF8P60827 252 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 PUS3Q9BZE2 481 aaKnown RBP11□□□□□ -0.65
ITGB1-217ENST00000494395 DBNDD1Q9H9R9 158 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 LEMD3Q9Y2U8 911 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 RIPOR2Q9Y4F9 1068 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 ZNF609O15014 1411 aa11□□□□□ -0.65
ITGB1-217ENST00000494395 SNAP23O00161 211 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 ECE2O60344 883 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 TOMM70O94826 608 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 KLRK1P26718 216 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
ITGB1-217ENST00000494395 LDHAL6AQ6ZMR3 332 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 C15orf52Q6ZUT6 534 aaKnown RBP10.99□□□□□ -0.65
ITGB1-217ENST00000494395 TXNRD3Q86VQ6 643 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 ANKRD2Q9GZV1 360 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 RCAN3Q9UKA8 241 aa10.99□□□□□ -0.65
ITGB1-217ENST00000494395 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
ITGB1-217ENST00000494395 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 GNAI3P08754 354 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 PTPN12Q05209 780 aaKnown RBP10.98□□□□□ -0.65
ITGB1-217ENST00000494395 MTX1Q13505 466 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 DOK7Q18PE1 504 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 LRRC24Q50LG9 513 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 CIAPIN1Q6FI81 312 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 DZIP1LQ8IYY4 767 aaKnown RBP10.98□□□□□ -0.65
ITGB1-217ENST00000494395 VGLL2Q8N8G2 317 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 RBM46Q8TBY0 533 aaKnown RBP10.98□□□□□ -0.65
ITGB1-217ENST00000494395 ZC3H12CQ9C0D7 883 aaKnown RBP10.98□□□□□ -0.65
ITGB1-217ENST00000494395 TAF1DQ9H5J8 278 aaPredicted RBP10.98□□□□□ -0.65
ITGB1-217ENST00000494395 KCNQ5Q9NR82 932 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 ZNF804BA4D1E1 1349 aa10.98□□□□□ -0.65
ITGB1-217ENST00000494395 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 PSMD14O00487 310 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 TAF5LO75529 589 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 RAD17O75943 681 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 TAF7LQ5H9L4 462 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
ITGB1-217ENST00000494395 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 HACL1Q9UJ83 578 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 GJA3Q9Y6H8 435 aa10.97□□□□□ -0.65
ITGB1-217ENST00000494395 ARAP2Q8WZ64 1704 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 ZBTB7BO15156 539 aaPredicted RBP10.96□□□□□ -0.65
ITGB1-217ENST00000494395 TBC1D12O60347 775 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 VIL1P09327 827 aaKnown RBP10.96□□□□□ -0.65
ITGB1-217ENST00000494395 EPS15P42566 896 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 TNIP1Q15025 636 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 ATG9AQ7Z3C6 839 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 COA1Q9GZY4 146 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 GPRC5DQ9NZD1 345 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 HDAC5Q9UQL6 1122 aa10.96□□□□□ -0.65
ITGB1-217ENST00000494395 MROH5Q6ZUA9 1318 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 EPHX2P34913 555 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
ITGB1-217ENST00000494395 FSTL1Q12841 308 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 UBE4AQ14139 1066 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
ITGB1-217ENST00000494395 PANK1Q8TE04 598 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 GMLQ99445 158 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 COPRSQ9NQ92 184 aa10.95□□□□□ -0.66
ITGB1-217ENST00000494395 SHTN1A0MZ66 631 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 EYA2O00167 538 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 PLIN1O60240 522 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 CIAO1O76071 339 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 GNAI2P04899 355 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 FGFR2P21802 821 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 C16orf71Q8IYS4 520 aaPredicted RBP10.94□□□□□ -0.66
ITGB1-217ENST00000494395 PTCD2Q8WV60 388 aaKnown RBP10.94□□□□□ -0.66
ITGB1-217ENST00000494395 DPF2Q92785 391 aa10.94□□□□□ -0.66
ITGB1-217ENST00000494395 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
ITGB1-217ENST00000494395 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
ITGB1-217ENST00000494395 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 EVI5O60447 810 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 PDE8BO95263 885 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 IL1R1P14778 569 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 RPS12P25398 132 aaKnown RBP10.93□□□□□ -0.66
ITGB1-217ENST00000494395 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
ITGB1-217ENST00000494395 LDHDQ86WU2 507 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 SMC1BQ8NDV3 1235 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 DDX12PQ92771 950 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 CD209Q9NNX6 404 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 MYH13Q9UKX3 1938 aa10.93□□□□□ -0.66
ITGB1-217ENST00000494395 USP17L3A6NCW0 530 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 USP17L4A6NCW7 530 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 SRGAP3O43295 1099 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 LMOD1P29536 600 aaPredicted RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 KCNJ4P48050 445 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 HIRAP54198 1017 aaPredicted RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 MVPQ14764 893 aaKnown RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 METTL24Q5JXM2 366 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 C20orf194Q5TEA3 1177 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms