RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SUZ12Q15022 739 aaKnown RBP4.04□□□□□ -1.76
LMNB1-207ENST00000494185 PRPF40BQ6NWY9 871 aaKnown RBP4.04□□□□□ -1.76
LMNB1-207ENST00000494185 DCAF5Q96JK2 942 aa4.04□□□□□ -1.76
LMNB1-207ENST00000494185 YIPF2Q9BWQ6 316 aa4.04□□□□□ -1.76
LMNB1-207ENST00000494185 BCL2L13Q9BXK5 485 aa4.04□□□□□ -1.76
LMNB1-207ENST00000494185 FAM8A1Q9UBU6 413 aa4.04□□□□□ -1.76
LMNB1-207ENST00000494185 TRIM33Q9UPN9 1127 aa4.04□□□□□ -1.76
LMNB1-207ENST00000494185 MSTNO14793 375 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 FSCN2O14926 492 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 SART1O43290 800 aaKnown RBP4.03□□□□□ -1.76
LMNB1-207ENST00000494185 RLBP1P12271 317 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 GATA4P43694 442 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 UVSSAQ2YD98 709 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 CCNJLQ8IV13 435 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 SLC7A3Q8WY07 619 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 LENG1Q96BZ8 264 aaPredicted RBP4.03□□□□□ -1.76
LMNB1-207ENST00000494185 CORO1BQ9BR76 489 aa4.03□□□□□ -1.76
LMNB1-207ENST00000494185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.03□□□□□ -1.76
LMNB1-207ENST00000494185 A0A096LPE4 126 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 A0A1W2PP55 124 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 A0A1W2PPZ6 126 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 ACPPP15309 386 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 EIF4BP23588 611 aaKnown RBP4.02□□□□□ -1.77
LMNB1-207ENST00000494185 GNA15P30679 374 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 DUOXA2Q1HG44 320 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 PEAR1Q5VY43 1037 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-207ENST00000494185 ANKRD34AQ69YU3 496 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 FDX2Q6P4F2 183 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 C8orf86Q6ZUL3 223 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 FBXO33Q7Z6M2 555 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 TXNRD3Q86VQ6 643 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 RGS22Q8NE09 1264 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 EPS8L3Q8TE67 593 aaKnown RBP4.02□□□□□ -1.77
LMNB1-207ENST00000494185 GIPC2Q8TF65 315 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 NXPE3Q969Y0 559 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 POP1Q99575 1024 aaKnown RBP4.02□□□□□ -1.77
LMNB1-207ENST00000494185 EMILIN2Q9BXX0 1053 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 RNF208Q9H0X6 261 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 AKTIPQ9H8T0 292 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 CYP4F12Q9HCS2 524 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 LATS2Q9NRM7 1088 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 GPN3Q9UHW5 284 aaPredicted RBP4.02□□□□□ -1.77
LMNB1-207ENST00000494185 WWC3Q9ULE0 1092 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 SOX13Q9UN79 622 aa4.02□□□□□ -1.77
LMNB1-207ENST00000494185 LINC01387J3KSC0 135 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 GSC2O15499 205 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 GAS2O43903 313 aaKnown RBP4.01□□□□□ -1.77
LMNB1-207ENST00000494185 HOXB4P17483 251 aaPredicted RBP4.01□□□□□ -1.77
LMNB1-207ENST00000494185 EPHA1P21709 976 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 ITPKAP23677 461 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 PCDH1Q08174 1060 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 PSMD2Q13200 908 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 GRIK5Q16478 980 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.01□□□□□ -1.77
LMNB1-207ENST00000494185 GPAT2Q6NUI2 795 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 ACAD11Q709F0 780 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 GIMAP7Q8NHV1 300 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 SETDB2Q96T68 719 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 DUSP9Q99956 384 aaKnown RBP4.01□□□□□ -1.77
LMNB1-207ENST00000494185 USP26Q9BXU7 913 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 HIF3AQ9Y2N7 669 aa4.01□□□□□ -1.77
LMNB1-207ENST00000494185 TMEM238LA0A1B0GVL6 79 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 NFKBIEO00221 500 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 TRPA1O75762 1119 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 GLB1P16278 677 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 FCGRTP55899 365 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 GSTM4Q03013 218 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 GRM2Q14416 872 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 LRRC14Q15048 493 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 PLA2G4EQ3MJ16 856 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 NUTM2GQ5VZR2 741 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 SCARA3Q6AZY7 606 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 PI16Q6UXB8 463 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 TMEM130Q8N3G9 435 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 FOXD4L4Q8WXT5 416 aaPredicted RBP4□□□□□ -1.77
LMNB1-207ENST00000494185 HHIPQ96QV1 700 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 RUSC1Q9BVN2 902 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 BCO2Q9BYV7 579 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 C12orf49Q9H741 205 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 SH2B1Q9NRF2 756 aaPredicted RBP4□□□□□ -1.77
LMNB1-207ENST00000494185 TMEM39AQ9NV64 488 aa4□□□□□ -1.77
LMNB1-207ENST00000494185 RBM47A0AV96 593 aaKnown RBP3.99□□□□□ -1.77
LMNB1-207ENST00000494185 FAM229AH3BQW9 127 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 DLL1O00548 723 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 SORBS3O60504 671 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 B3GALT4O96024 378 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 SLFN14P0C7P3 912 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 ZNF16P17020 682 aaPredicted RBP3.99□□□□□ -1.77
LMNB1-207ENST00000494185 COL8A1P27658 744 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 CDC25BP30305 580 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 TAGLNQ01995 201 aaKnown RBP3.99□□□□□ -1.77
LMNB1-207ENST00000494185 ADGRE1Q14246 886 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 PDE3AQ14432 1141 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 MBTPS1Q14703 1052 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 SETDB1Q15047 1291 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 TXNDC11Q6PKC3 985 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 SLC51AQ86UW1 340 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 TCF12Q99081 682 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 ZNF576Q9H609 170 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 ABCB6Q9NP58 842 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms