RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 JAG2Q9Y219 1238 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 NF2P35240 595 aa16.89■□□□□ 0.29
CTDSP1-212ENST00000494067 FKBP1BP68106 108 aa16.89■□□□□ 0.29
CTDSP1-212ENST00000494067 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
CTDSP1-212ENST00000494067 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
CTDSP1-212ENST00000494067 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
CTDSP1-212ENST00000494067 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
CTDSP1-212ENST00000494067 IL1R1P14778 569 aa16.88■□□□□ 0.29
CTDSP1-212ENST00000494067 ALDH1L2Q3SY69 923 aa16.87■□□□□ 0.29
CTDSP1-212ENST00000494067 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
CTDSP1-212ENST00000494067 GYG1P46976 350 aa16.86■□□□□ 0.29
CTDSP1-212ENST00000494067 TTLL12Q14166 644 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-212ENST00000494067 REM2Q8IYK8 340 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-212ENST00000494067 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
CTDSP1-212ENST00000494067 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
CTDSP1-212ENST00000494067 RFX5P48382 616 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-212ENST00000494067 APOBEC3FQ8IUX4 373 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-212ENST00000494067 FAM84BQ96KN1 310 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-212ENST00000494067 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 MYO1BO43795 1136 aa16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 SLC10A3P09131 477 aa16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 DLGAP5Q15398 846 aa16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 GRIK5Q16478 980 aa16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 RASAL3Q86YV0 1011 aa16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 NOB1Q9ULX3 412 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 FZD1Q9UP38 647 aa16.84■□□□□ 0.29
CTDSP1-212ENST00000494067 FKBP1AP62942 108 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-212ENST00000494067 UBE4AQ14139 1066 aa16.83■□□□□ 0.28
CTDSP1-212ENST00000494067 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-212ENST00000494067 CASP8AP2Q9UKL3 1982 aa16.83■□□□□ 0.28
CTDSP1-212ENST00000494067 TNNQ9UQP3 1299 aa16.83■□□□□ 0.28
CTDSP1-212ENST00000494067 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 MROH5Q6ZUA9 1318 aa16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 ARMC9Q7Z3E5 817 aa16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 PRMT6Q96LA8 375 aaPredicted RBP16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
CTDSP1-212ENST00000494067 VPS37DQ86XT2 251 aa16.81■□□□□ 0.28
CTDSP1-212ENST00000494067 MIER1Q8N108 512 aa16.81■□□□□ 0.28
CTDSP1-212ENST00000494067 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
CTDSP1-212ENST00000494067 ABHD8Q96I13 439 aa16.81■□□□□ 0.28
CTDSP1-212ENST00000494067 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-212ENST00000494067 OTOFQ9HC10 1997 aa16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 MYH13Q9UKX3 1938 aa16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■□□□ 11.9
CTDSP1-212ENST00000494067 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 CFAP100Q494V2 611 aa16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 FBXO33Q7Z6M2 555 aa16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
CTDSP1-212ENST00000494067 LAMB1P07942 1786 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 PDE8BO95263 885 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 FGFR2P21802 821 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 PRKG1Q13976 671 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 CAVIN4Q5BKX8 364 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 ATG9AQ7Z3C6 839 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 PPP2R3BQ9Y5P8 575 aa16.79■□□□□ 0.28
CTDSP1-212ENST00000494067 FRAT2O75474 233 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 TRPA1O75762 1119 aa16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 MFSD14BQ5SR56 506 aa16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 MEIS3Q99687 375 aa16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 RNF186Q9NXI6 227 aa16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
CTDSP1-212ENST00000494067 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
CTDSP1-212ENST00000494067 PPP1R12BO60237 982 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-212ENST00000494067 BCAMP50895 628 aa16.77■□□□□ 0.28
CTDSP1-212ENST00000494067 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
CTDSP1-212ENST00000494067 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.28
CTDSP1-212ENST00000494067 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-212ENST00000494067 BCAR3O75815 825 aa16.76■□□□□ 0.27
CTDSP1-212ENST00000494067 DGKZQ13574 1117 aa16.76■□□□□ 0.27
CTDSP1-212ENST00000494067 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
CTDSP1-212ENST00000494067 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-212ENST00000494067 EYA2O00167 538 aa16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 TNFAIP1Q13829 316 aa16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 SIL1Q9H173 461 aa16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 VEZTQ9HBM0 779 aa16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 TTF2Q9UNY4 1162 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-212ENST00000494067 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 LDLRAD1Q5T700 205 aa16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 NBPF12Q5TAG4 269 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 TBC1D22AQ8WUA7 517 aa16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 API5Q9BZZ5 524 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 MCOLN1Q9GZU1 580 aa16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 TDRD3Q9H7E2 651 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-212ENST00000494067 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms