RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 F8W031 263 aaPredicted RBP12.27□□□□□ -0.45
UFD1-210ENST00000494054 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
UFD1-210ENST00000494054 MMP14P50281 582 aa12.27□□□□□ -0.45
UFD1-210ENST00000494054 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
UFD1-210ENST00000494054 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.45
UFD1-210ENST00000494054 NOGQ13253 232 aa12.27□□□□□ -0.45
UFD1-210ENST00000494054 TDRD7Q8NHU6 1098 aaKnown RBP12.27□□□□□ -0.45
UFD1-210ENST00000494054 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
UFD1-210ENST00000494054 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.45
UFD1-210ENST00000494054 UBE2Q2LH0YL09 131 aa12.26□□□□□ -0.45
UFD1-210ENST00000494054 HIBADHP31937 336 aaKnown RBP12.26□□□□□ -0.45
UFD1-210ENST00000494054 RFX5P48382 616 aaPredicted RBP12.26□□□□□ -0.45
UFD1-210ENST00000494054 RARSP54136 660 aaKnown RBP12.26□□□□□ -0.45
UFD1-210ENST00000494054 KIF23Q02241 960 aaPredicted RBP12.26□□□□□ -0.45
UFD1-210ENST00000494054 MIER1Q8N108 512 aa12.26□□□□□ -0.45
UFD1-210ENST00000494054 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
UFD1-210ENST00000494054 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
UFD1-210ENST00000494054 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
UFD1-210ENST00000494054 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
UFD1-210ENST00000494054 SLC10A3P09131 477 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
UFD1-210ENST00000494054 FKBP1BP68106 108 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 DLGAP5Q15398 846 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 CFAP100Q494V2 611 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 MTMR14Q8NCE2 650 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 PRMT6Q96LA8 375 aaPredicted RBP12.25□□□□□ -0.45
UFD1-210ENST00000494054 AOX1Q06278 1338 aa12.25□□□□□ -0.45
UFD1-210ENST00000494054 PDE8BO95263 885 aa12.24□□□□□ -0.45
UFD1-210ENST00000494054 GRIK5Q16478 980 aa12.24□□□□□ -0.45
UFD1-210ENST00000494054 RASAL3Q86YV0 1011 aa12.24□□□□□ -0.45
UFD1-210ENST00000494054 API5Q9BZZ5 524 aaKnown RBP12.24□□□□□ -0.45
UFD1-210ENST00000494054 IQSEC3Q9UPP2 1182 aaPredicted RBP12.24□□□□□ -0.45
UFD1-210ENST00000494054 CLRN2A0PK11 232 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 EYA2O00167 538 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
UFD1-210ENST00000494054 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 PTPN12Q05209 780 aaKnown RBP12.23□□□□□ -0.45
UFD1-210ENST00000494054 PRKG1Q13976 671 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 MFSD14BQ5SR56 506 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
UFD1-210ENST00000494054 CSRNP1Q96S65 589 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
UFD1-210ENST00000494054 CA12O43570 354 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 FGFR2P21802 821 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 BCAMP50895 628 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
UFD1-210ENST00000494054 DIEXFQ68CQ4 756 aaKnown RBP12.22□□□□□ -0.45
UFD1-210ENST00000494054 ATG9AQ7Z3C6 839 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 MEIS3Q99687 375 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 DEFB129Q9H1M3 183 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 TTF2Q9UNY4 1162 aaKnown RBP12.22□□□□□ -0.45
UFD1-210ENST00000494054 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
UFD1-210ENST00000494054 LRRFIP2Q9Y608 721 aaKnown RBP12.22□□□□□ -0.45
UFD1-210ENST00000494054 BCAR3O75815 825 aa12.21□□□□□ -0.45
UFD1-210ENST00000494054 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.45
UFD1-210ENST00000494054 CHAF1AQ13111 956 aaPredicted RBP12.21□□□□□ -0.45
UFD1-210ENST00000494054 ARHGAP45Q92619 1136 aa12.21□□□□□ -0.45
UFD1-210ENST00000494054 RNF186Q9NXI6 227 aa12.21□□□□□ -0.45
UFD1-210ENST00000494054 TRPA1O75762 1119 aa12.2□□□□□ -0.46
UFD1-210ENST00000494054 NF2P35240 595 aa12.2□□□□□ -0.46
UFD1-210ENST00000494054 PUM3Q15397 648 aaKnown RBP12.2□□□□□ -0.46
UFD1-210ENST00000494054 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
UFD1-210ENST00000494054 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
UFD1-210ENST00000494054 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
UFD1-210ENST00000494054 SIL1Q9H173 461 aa12.2□□□□□ -0.46
UFD1-210ENST00000494054 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
UFD1-210ENST00000494054 KIF16BQ96L93 1317 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 SSC5DA1L4H1 1573 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 MYO1BO43795 1136 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 IFIT1P09914 478 aaKnown RBP12.19□□□□□ -0.46
UFD1-210ENST00000494054 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 NBPF12Q5TAG4 269 aaPredicted RBP12.19□□□□□ -0.46
UFD1-210ENST00000494054 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 TDRD3Q9H7E2 651 aaKnown RBP12.19□□□□□ -0.46
UFD1-210ENST00000494054 ZNF70Q9UC06 446 aaPredicted RBP12.19□□□□□ -0.46
UFD1-210ENST00000494054 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
UFD1-210ENST00000494054 ANGEL1Q9UNK9 670 aaKnown RBP12.19□□□□□ -0.46
UFD1-210ENST00000494054 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
UFD1-210ENST00000494054 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
UFD1-210ENST00000494054 CIAO1O76071 339 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 TRIM27P14373 513 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 CRKP46108 304 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
UFD1-210ENST00000494054 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
UFD1-210ENST00000494054 RASA3Q14644 834 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 DZIP1LQ8IYY4 767 aaKnown RBP12.18□□□□□ -0.46
UFD1-210ENST00000494054 LPIN2Q92539 896 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 PPP2R3BQ9Y5P8 575 aa12.18□□□□□ -0.46
UFD1-210ENST00000494054 COL1A1P02452 1464 aaPredicted RBP12.18□□□□□ -0.46
UFD1-210ENST00000494054 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 SLC5A1P13866 664 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms