RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PODNQ7Z5L7 613 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 CERS5Q8N5B7 392 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 MRPL50Q8N5N7 158 aaKnown RBP10.26□□□□□ -0.77
HDAC6-234ENST00000493923 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 CDCA7LQ96GN5 454 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 DDRGK1Q96HY6 314 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 PUS3Q9BZE2 481 aaKnown RBP10.26□□□□□ -0.77
HDAC6-234ENST00000493923 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 GBA2Q9HCG7 927 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-234ENST00000493923 GRM8O00222 908 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 SASH1O94885 1247 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 ECE1P42892 770 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 SLC4A10Q6U841 1118 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
HDAC6-234ENST00000493923 RTN4Q9NQC3 1192 aaKnown RBP10.25□□□□□ -0.77
HDAC6-234ENST00000493923 JAG2Q9Y219 1238 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 LEMD3Q9Y2U8 911 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
HDAC6-234ENST00000493923 ANKRD18BA2A2Z9 1011 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 PLIN1O60240 522 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 NBPF7P0C2Y1 421 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-234ENST00000493923 MAP2K2P36507 400 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 GTF2IP78347 998 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 SSH1Q8WYL5 1049 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 ZBED3Q96IU2 234 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-234ENST00000493923 HHIPL1Q96JK4 782 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 MPHOSPH8Q99549 860 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 COA1Q9GZY4 146 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 CD209Q9NNX6 404 aa10.24□□□□□ -0.77
HDAC6-234ENST00000493923 WNT10BO00744 389 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 KIF23Q02241 960 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-234ENST00000493923 SLFN5Q08AF3 891 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 GSE1Q14687 1217 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 STRIP1Q5VSL9 837 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 TTLL5Q6EMB2 1281 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 RGMBQ6NW40 437 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 KIAA0825Q8IV33 1275 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 ANKRD44Q8N8A2 993 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 FZD1Q9UP38 647 aa10.23□□□□□ -0.77
HDAC6-234ENST00000493923 UBE2Q2LH0YL09 131 aa10.22□□□□□ -0.77
HDAC6-234ENST00000493923 RRP9O43818 475 aaKnown RBP10.22□□□□□ -0.77
HDAC6-234ENST00000493923 ALDH1L1O75891 902 aa10.22□□□□□ -0.77
HDAC6-234ENST00000493923 BRPF1P55201 1214 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-234ENST00000493923 HNRNPUQ00839 825 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC6-234ENST00000493923 IFIT5Q13325 482 aaKnown RBP10.22□□□□□ -0.77
HDAC6-234ENST00000493923 C15orf52Q6ZUT6 534 aaKnown RBP10.22□□□□□ -0.77
HDAC6-234ENST00000493923 RASAL3Q86YV0 1011 aa10.22□□□□□ -0.77
HDAC6-234ENST00000493923 C2orf69Q8N8R5 385 aa10.22□□□□□ -0.77
HDAC6-234ENST00000493923 SRCIN1Q9C0H9 1055 aa10.22□□□□□ -0.77
HDAC6-234ENST00000493923 C9orf78Q9NZ63 289 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-234ENST00000493923 PAPPA2Q9BXP8 1791 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 SLC10A3P09131 477 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 KCNJ4P48050 445 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 ZNF157P51786 506 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-234ENST00000493923 GRIK5Q16478 980 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 LRRC24Q50LG9 513 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 KLHDC4Q8TBB5 520 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 ABHD8Q96I13 439 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 CSRNP1Q96S65 589 aa10.21□□□□□ -0.77
HDAC6-234ENST00000493923 BICC1Q9H694 974 aaKnown RBP10.21□□□□□ -0.77
HDAC6-234ENST00000493923 UTYO14607 1347 aa10.21□□□□□ -0.78
HDAC6-234ENST00000493923 SSC5DA1L4H1 1573 aa10.21□□□□□ -0.78
HDAC6-234ENST00000493923 AKAP11Q9UKA4 1901 aa10.21□□□□□ -0.78
HDAC6-234ENST00000493923 F8W031 263 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-234ENST00000493923 IL1R1P14778 569 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 GYG1P46976 350 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 NOGQ13253 232 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 PRKG1Q13976 671 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 LDHAL6AQ6ZMR3 332 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 TRMT2AQ8IZ69 625 aaKnown RBP10.2□□□□□ -0.78
HDAC6-234ENST00000493923 PITPNM2Q9BZ72 1349 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 USP44Q9H0E7 712 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 RIPOR2Q9Y4F9 1068 aa10.2□□□□□ -0.78
HDAC6-234ENST00000493923 ECM29Q5VYK3 1845 aa10.19□□□□□ -0.78
HDAC6-234ENST00000493923 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
HDAC6-234ENST00000493923 E9PSI1 815 aa10.19□□□□□ -0.78
HDAC6-234ENST00000493923 CCDC57Q2TAC2 916 aa10.19□□□□□ -0.78
HDAC6-234ENST00000493923 RABL6Q3YEC7 729 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-234ENST00000493923 FAM84BQ96KN1 310 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-234ENST00000493923 CNNM1Q9NRU3 951 aa10.19□□□□□ -0.78
HDAC6-234ENST00000493923 RNF186Q9NXI6 227 aa10.19□□□□□ -0.78
HDAC6-234ENST00000493923 IQSEC3Q9UPP2 1182 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-234ENST00000493923 MYO3BQ8WXR4 1341 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 CLRN2A0PK11 232 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 TRPA1O75762 1119 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 MS4A1P11836 297 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 RFX5P48382 616 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-234ENST00000493923 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
HDAC6-234ENST00000493923 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
HDAC6-234ENST00000493923 CFAP100Q494V2 611 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 VGLL2Q8N8G2 317 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 PRMT6Q96LA8 375 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-234ENST00000493923 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 MCOLN1Q9GZU1 580 aa10.18□□□□□ -0.78
HDAC6-234ENST00000493923 FAM205AQ6ZU69 1335 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms