RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PRC1O43663 620 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 CDKL5O76039 1030 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 SLC5A1P13866 664 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 SLC9C2Q5TAH2 1124 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 CPLX2Q6PUV4 134 aaKnown RBP11.3□□□□□ -0.6
NPHP3-209ENST00000493732 CCDC73Q6ZRK6 1079 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
NPHP3-209ENST00000493732 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
NPHP3-209ENST00000493732 AHDC1Q5TGY3 1603 aaPredicted RBP11.3□□□□□ -0.6
NPHP3-209ENST00000493732 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 CPLX1O14810 134 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 MCAMP43121 646 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
NPHP3-209ENST00000493732 ALX1Q15699 326 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 BRAPQ7Z569 592 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
NPHP3-209ENST00000493732 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
NPHP3-209ENST00000493732 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
NPHP3-209ENST00000493732 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 MYH7P12883 1935 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
NPHP3-209ENST00000493732 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 SCARF1Q14162 830 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 TTLL5Q6EMB2 1281 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 PGBD1Q96JS3 809 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
NPHP3-209ENST00000493732 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
NPHP3-209ENST00000493732 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 KLF18A0A0U1RQI7 1052 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 SLFNL1Q499Z3 407 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.28□□□□□ -0.6
NPHP3-209ENST00000493732 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 UTP14AQ9BVJ6 771 aaKnown RBP11.28□□□□□ -0.6
NPHP3-209ENST00000493732 MRVI1Q9Y6F6 885 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPHP3-209ENST00000493732 NUP98P52948 1817 aa11.28□□□□□ -0.6
NPHP3-209ENST00000493732 KINO60870 393 aaKnown RBP11.27□□□□□ -0.6
NPHP3-209ENST00000493732 GNAT2P19087 354 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 FGFR2P21802 821 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.6
NPHP3-209ENST00000493732 DDB1Q16531 1140 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 CAMK4Q16566 473 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 SMARCC1Q92922 1105 aaPredicted RBP11.27□□□□□ -0.6
NPHP3-209ENST00000493732 AIDAQ96BJ3 306 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 C8orf76Q96K31 380 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.6
NPHP3-209ENST00000493732 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.6
NPHP3-209ENST00000493732 WNK3Q9BYP7 1800 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 LRP5O75197 1615 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 RGL2O15211 777 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 FOXP2O15409 715 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 NR1I2O75469 434 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 IDH1O75874 414 aaKnown RBP11.27□□□□□ -0.61
NPHP3-209ENST00000493732 YEATS4O95619 227 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 FAM160A1Q05DH4 1040 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
NPHP3-209ENST00000493732 FBXO18Q8NFZ0 1043 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 MTA3Q9BTC8 594 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
NPHP3-209ENST00000493732 DTNBO60941 627 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 APPP05067 770 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 PDE6AP16499 860 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
NPHP3-209ENST00000493732 ZNF165P49910 485 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 HAND2P61296 217 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 ANO6Q4KMQ2 910 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 SYNE3Q6ZMZ3 975 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
NPHP3-209ENST00000493732 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 NCOA5Q9HCD5 579 aaKnown RBP11.26□□□□□ -0.61
NPHP3-209ENST00000493732 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 ORC3Q9UBD5 711 aaPredicted RBP11.26□□□□□ -0.61
NPHP3-209ENST00000493732 AKAP11Q9UKA4 1901 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
NPHP3-209ENST00000493732 PATL2C9JE40 543 aaKnown RBP11.25□□□□□ -0.61
NPHP3-209ENST00000493732 ME1P48163 572 aa11.25□□□□□ -0.61
NPHP3-209ENST00000493732 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
NPHP3-209ENST00000493732 STX1AQ16623 288 aa11.25□□□□□ -0.61
NPHP3-209ENST00000493732 CHST3Q7LGC8 479 aa11.25□□□□□ -0.61
NPHP3-209ENST00000493732 CKAP2LQ8IYA6 745 aa11.25□□□□□ -0.61
NPHP3-209ENST00000493732 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
NPHP3-209ENST00000493732 MRPS27Q92552 414 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms