RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ATG9AQ7Z3C6 839 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 FBXO33Q7Z6M2 555 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 VGLL2Q8N8G2 317 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-207ENST00000493648 TDRD7Q8NHU6 1098 aaKnown RBP8.67□□□□□ -1.02
TOP3A-207ENST00000493648 LPIN2Q92539 896 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 POLR2AP24928 1970 aaKnown RBP8.66□□□□□ -1.02
TOP3A-207ENST00000493648 A0A1B0GUL6 1792 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 FAM205AQ6ZU69 1335 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 TRAF5O00463 557 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 EGFRP00533 1210 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 RLBP1P12271 317 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 ATP8B2P98198 1209 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 G3BP1Q13283 466 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOP3A-207ENST00000493648 ATP2B3Q16720 1220 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 KRT26Q7Z3Y9 468 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 KIAA0825Q8IV33 1275 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 KLRG1Q96E93 195 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 GLIS2Q9BZE0 524 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-207ENST00000493648 CHMP4BQ9H444 224 aaKnown RBP8.66□□□□□ -1.02
TOP3A-207ENST00000493648 GNL3LQ9NVN8 582 aaKnown RBP8.66□□□□□ -1.02
TOP3A-207ENST00000493648 PA2G4Q9UQ80 394 aaKnown RBP8.66□□□□□ -1.02
TOP3A-207ENST00000493648 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
TOP3A-207ENST00000493648 CELF2O95319 508 aaKnown RBP8.65□□□□□ -1.02
TOP3A-207ENST00000493648 FGFR2P21802 821 aa8.65□□□□□ -1.02
TOP3A-207ENST00000493648 BCAMP50895 628 aa8.65□□□□□ -1.02
TOP3A-207ENST00000493648 DEFB115Q30KQ5 88 aa8.65□□□□□ -1.02
TOP3A-207ENST00000493648 ANGEL2Q5VTE6 544 aaKnown RBP8.65□□□□□ -1.02
TOP3A-207ENST00000493648 PANK1Q8TE04 598 aa8.65□□□□□ -1.02
TOP3A-207ENST00000493648 TBC1D22AQ8WUA7 517 aa8.65□□□□□ -1.02
TOP3A-207ENST00000493648 ABT1Q9ULW3 272 aaKnown RBP8.65□□□□□ -1.02
TOP3A-207ENST00000493648 JAG2Q9Y219 1238 aa8.65□□□□□ -1.02
TOP3A-207ENST00000493648 TRPM7Q96QT4 1865 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 PNMA6EA0A0J9YXQ4 647 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 F8W031 263 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-207ENST00000493648 WNT10BO00744 389 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 MYO1BO43795 1136 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 FMR1Q06787 632 aaKnown RBP eCLIP8.64□□□□□ -1.03
TOP3A-207ENST00000493648 TFCP2Q12800 502 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 CHAF1AQ13111 956 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-207ENST00000493648 DLGAP5Q15398 846 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 NBPF9Q3BBW0 867 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 MFSD14BQ5SR56 506 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 CST9Q5W186 159 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 CERS5Q8N5B7 392 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 YTHDC1Q96MU7 727 aaKnown RBP8.64□□□□□ -1.03
TOP3A-207ENST00000493648 ZNF408Q9H9D4 720 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 GGA3Q9NZ52 723 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
TOP3A-207ENST00000493648 DDX19BQ9UMR2 479 aa8.64□□□□□ -1.03
TOP3A-207ENST00000493648 IQSEC3Q9UPP2 1182 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-207ENST00000493648 PITPNM2Q9BZ72 1349 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
TOP3A-207ENST00000493648 RBM5P52756 815 aaKnown RBP eCLIP8.63□□□□□ -1.03
TOP3A-207ENST00000493648 TIMM10P62072 90 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-207ENST00000493648 POLA2Q14181 598 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 MVPQ14764 893 aaKnown RBP8.63□□□□□ -1.03
TOP3A-207ENST00000493648 C2orf69Q8N8R5 385 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 SSH3Q8TE77 659 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 TTF2Q9UNY4 1162 aaKnown RBP8.63□□□□□ -1.03
TOP3A-207ENST00000493648 COG6Q9Y2V7 657 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
TOP3A-207ENST00000493648 ASTN2O75129 1339 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-207ENST00000493648 A0A1B0GUL7 405 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 RASSF10A6NK89 507 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 ADM5C9JUS6 153 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 SEMA3EO15041 775 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 ECE1P42892 770 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 CFAP100Q494V2 611 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 GORABQ5T7V8 394 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 PAXIP1Q6ZW49 1069 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-207ENST00000493648 APOBEC3FQ8IUX4 373 aaKnown RBP8.62□□□□□ -1.03
TOP3A-207ENST00000493648 JMYQ8N9B5 988 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 MRIQ9BWK5 157 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 DENND2AQ9ULE3 1009 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 SUGT1Q9Y2Z0 365 aa8.62□□□□□ -1.03
TOP3A-207ENST00000493648 CNTNAP1P78357 1384 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 ZNF646O15015 1829 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 NF2P35240 595 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 VEGFBP49765 207 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 CEP85Q6P2H3 762 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 DLK2Q6UY11 383 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 SAPCD2Q86UD0 394 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 RPAP2Q8IXW5 612 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 CDCA5Q96FF9 252 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 XAGE2Q96GT9 111 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 ZBED3Q96IU2 234 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 HHIPL1Q96JK4 782 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms