RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 LMAN1P49257 510 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 AARSP49588 968 aaKnown RBP eCLIP7.79□□□□□ -1.16
EWSR1-220ENST00000493426 FANCCQ00597 558 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
EWSR1-220ENST00000493426 TUBB8Q3ZCM7 444 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 SULT6B1Q6IMI4 303 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 TMC6Q7Z403 805 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 SRGAP1Q7Z6B7 1085 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 TMEM139Q8IV31 216 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 CLASRPQ8N2M8 674 aaKnown RBP7.79□□□□□ -1.16
EWSR1-220ENST00000493426 AOPEPQ8N6M6 819 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 MRPS27Q92552 414 aaKnown RBP7.79□□□□□ -1.16
EWSR1-220ENST00000493426 BRF1Q92994 677 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 KIFC2Q96AC6 838 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 ACBD3Q9H3P7 528 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 IFNKQ9P0W0 207 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 TSPYL4Q9UJ04 414 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 TECPR2O15040 1411 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 HMGB1P09429 215 aaKnown RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 CCDC172P0C7W6 258 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 USP8P40818 1118 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 TRDNQ13061 729 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 DNAJC21Q5F1R6 531 aaKnown RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 CT47A1Q5JQC4 288 aaPredicted RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 LRRC31Q6UY01 552 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 NME9Q86XW9 330 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 FSIP1Q8NA03 581 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 CTCFLQ8NI51 663 aaPredicted RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 ERCC4Q92889 916 aaPredicted RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 LARP6Q9BRS8 491 aaKnown RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 GOLPH3LQ9H4A5 285 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 STK26Q9P289 416 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 PPP2R2CQ9Y2T4 447 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 CHMP3Q9Y3E7 222 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 CCDC61Q9Y6R9 512 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 CEMIPQ8WUJ3 1361 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 DIP2AQ14689 1571 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 NCAPD2Q15021 1401 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 NEDD4P46934 1319 aa7.78□□□□□ -1.16
EWSR1-220ENST00000493426 ATXN2Q99700 1313 aaKnown RBP7.78□□□□□ -1.16
EWSR1-220ENST00000493426 LOC102724159A0A0B4J2E5 919 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 H3BQV1 296 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 CUTAO60888 179 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 CMA1P23946 247 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 PWP2Q15269 919 aaKnown RBP7.77□□□□□ -1.17
EWSR1-220ENST00000493426 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 WDR93Q6P2C0 686 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 MCM10Q7L590 875 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 TADA2BQ86TJ2 420 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.77□□□□□ -1.17
EWSR1-220ENST00000493426 KCNG4Q8TDN1 519 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 USP28Q96RU2 1077 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 HSD3B7Q9H2F3 369 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 CDC23Q9UJX2 597 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 CEP83Q9Y592 693 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 MYO5BQ9ULV0 1848 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 ABCC6O95255 1503 aa7.77□□□□□ -1.17
EWSR1-220ENST00000493426 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
EWSR1-220ENST00000493426 C21orf2O43822 256 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 SHOX2O60902 331 aaPredicted RBP7.76□□□□□ -1.17
EWSR1-220ENST00000493426 TAF5LO75529 589 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 SLC3A2P08195 630 aaKnown RBP7.76□□□□□ -1.17
EWSR1-220ENST00000493426 FECHP22830 423 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 FBLN1P23142 703 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 ATP6V1AP38606 617 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 GYS2P54840 703 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 GNG11P61952 73 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 BEND3Q5T5X7 828 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 CERS3Q8IU89 383 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 NSUN7Q8NE18 718 aaKnown RBP7.76□□□□□ -1.17
EWSR1-220ENST00000493426 DNAAF4Q8WXU2 420 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 ZNF274Q96GC6 653 aaPredicted RBP7.76□□□□□ -1.17
EWSR1-220ENST00000493426 NEK1Q96PY6 1258 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 SDF4Q9BRK5 362 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 CXorf56Q9H5V9 222 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 PCDHA7Q9UN72 937 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 OVOS2A0A0J9YW53 1432 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 OVOS2Q6IE36 1432 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 MAP3K15Q6ZN16 1313 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 SALL1Q9NSC2 1324 aa7.76□□□□□ -1.17
EWSR1-220ENST00000493426 CEP170BQ9Y4F5 1589 aaPredicted RBP7.76□□□□□ -1.17
EWSR1-220ENST00000493426 MON2Q7Z3U7 1717 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 LRRC37A3O60309 1634 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 CPS1P31327 1500 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 TOP1P11387 765 aaKnown RBP7.75□□□□□ -1.17
EWSR1-220ENST00000493426 MCM3P25205 808 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 AMPHP49418 695 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 UBASH3AP57075 661 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 CHMP4BP1P59074 171 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 MYL5Q02045 173 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 DDR1Q08345 913 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 NMIQ13287 307 aaPredicted RBP7.75□□□□□ -1.17
EWSR1-220ENST00000493426 SAFB2Q14151 953 aaKnown RBP eCLIP7.75□□□□□ -1.17
EWSR1-220ENST00000493426 MLECQ14165 292 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 WHAMMP3Q1A5X7 153 aa7.75□□□□□ -1.17
EWSR1-220ENST00000493426 MTHFSDQ2M296 383 aaKnown RBP7.75□□□□□ -1.17
EWSR1-220ENST00000493426 DPCR1Q3MIW9 517 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms