RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 PHACTR3Q96KR7 559 aa15.46■□□□□ 0.07
TRIM11-204ENST00000493030 CKAP4Q07065 602 aaKnown RBP15.46■□□□□ 0.06
TRIM11-204ENST00000493030 PAXBP1Q9Y5B6 917 aa15.46■□□□□ 0.06
TRIM11-204ENST00000493030 PTPDC1A2A3K4 754 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 EEF2P13639 858 aaKnown RBP15.45■□□□□ 0.06
TRIM11-204ENST00000493030 SYT1P21579 422 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 HSPA2P54652 639 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 C19orf44Q9H6X5 657 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CCDC171Q6TFL3 1326 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 GNPATO15228 680 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 ANKRD2Q9GZV1 360 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CTAGE15A4D2H0 777 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CTAGE8P0CG41 777 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 FERP16591 822 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 POLD1P28340 1107 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 SPECC1LQ69YQ0 1117 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CTAGE6Q86UF2 777 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CTAGE4Q8IX94 777 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CCDC155Q8N6L0 562 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 CEP63Q96MT8 703 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
TRIM11-204ENST00000493030 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
TRIM11-204ENST00000493030 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
TRIM11-204ENST00000493030 KAT6BQ8WYB5 2073 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 DCTPP1Q9H773 170 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 SAP30BPQ9UHR5 308 aaKnown RBP15.44■□□□□ 0.06
TRIM11-204ENST00000493030 RLBP1P12271 317 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 TERF1P54274 439 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
TRIM11-204ENST00000493030 PAIP2Q9BPZ3 127 aaKnown RBP15.44■□□□□ 0.06
TRIM11-204ENST00000493030 SERPINA10Q9UK55 444 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
TRIM11-204ENST00000493030 GNA11P29992 359 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 ARL1P40616 181 aaPredicted RBP15.44■□□□□ 0.06
TRIM11-204ENST00000493030 FAM89AQ96GI7 184 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 EYA3Q99504 573 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 KIAA0556O60303 1618 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 A2MP01023 1474 aa15.44■□□□□ 0.06
TRIM11-204ENST00000493030 MBD4O95243 580 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
TRIM11-204ENST00000493030 TACC1O75410 805 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 NCBP1Q09161 790 aaKnown RBP15.43■□□□□ 0.06
TRIM11-204ENST00000493030 B4DLN1 442 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 ATP2C2O75185 946 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 HOXC9P31274 260 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 MRPL12P52815 198 aaKnown RBP15.43■□□□□ 0.06
TRIM11-204ENST00000493030 BMS1Q14692 1282 aaKnown RBP15.43■□□□□ 0.06
TRIM11-204ENST00000493030 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 DTHD1Q6ZMT9 781 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 BACH1O14867 736 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 PLCB3Q01970 1234 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 GSTA5Q7RTV2 222 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 UBXN1Q04323 297 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 NPATQ14207 1427 aa15.43■□□□□ 0.06
TRIM11-204ENST00000493030 IQCGQ9H095 443 aaKnown RBP15.43■□□□□ 0.06
TRIM11-204ENST00000493030 RUFY3Q7L099 469 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 ATP10BO94823 1461 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
TRIM11-204ENST00000493030 RAB3GAP1Q15042 981 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 OTUD6BQ8N6M0 293 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 CCDC42Q96M95 316 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 CALCOCO1Q9P1Z2 691 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 TYRO3Q06418 890 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 CCDC50Q8IVM0 306 aa15.42■□□□□ 0.06
TRIM11-204ENST00000493030 TTC12Q9H892 705 aaPredicted RBP15.42■□□□□ 0.06
TRIM11-204ENST00000493030 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 ZFP91Q96JP5 570 aaPredicted RBP15.41■□□□□ 0.06
TRIM11-204ENST00000493030 RASAL2Q9UJF2 1139 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 PARP1P09874 1014 aaKnown RBP15.41■□□□□ 0.06
TRIM11-204ENST00000493030 PRPHP41219 470 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 TIMM10P62072 90 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 NEK11Q8NG66 645 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRIM11-204ENST00000493030 LRRC45Q96CN5 670 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 POLR3AO14802 1390 aaPredicted RBP15.41■□□□□ 0.06
TRIM11-204ENST00000493030 KCNA6P17658 529 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 CHMLP26374 656 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 MCM6Q14566 821 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 DDX12PQ92771 950 aa15.41■□□□□ 0.06
TRIM11-204ENST00000493030 CPA1P15085 419 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 PLEKHM2Q8IWE5 1019 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 TEX11Q8IYF3 940 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
TRIM11-204ENST00000493030 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 MRPS9P82933 396 aaKnown RBP15.4■□□□□ 0.06
TRIM11-204ENST00000493030 CNBD1Q8NA66 436 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 KRT83P78385 493 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms