RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 HIBADHP31937 336 aaKnown RBP15.66■□□□□ 0.1
COL6A1-205ENST00000492851 RASAL3Q86YV0 1011 aa15.66■□□□□ 0.1
COL6A1-205ENST00000492851 SSH1Q8WYL5 1049 aa15.66■□□□□ 0.1
COL6A1-205ENST00000492851 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
COL6A1-205ENST00000492851 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
COL6A1-205ENST00000492851 RIPOR2Q9Y4F9 1068 aa15.66■□□□□ 0.1
COL6A1-205ENST00000492851 UNCXA6NJT0 531 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 UBE2Q2LH0YL09 131 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 SUPT20HL1Q3ZLR7 823 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 CAVIN4Q5BKX8 364 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 VPS37DQ86XT2 251 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 DEFB129Q9H1M3 183 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 SPEF2Q9C093 1822 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 FAM205AQ6ZU69 1335 aa15.65■□□□□ 0.1
COL6A1-205ENST00000492851 COL1A1P02452 1464 aaPredicted RBP15.65■□□□□ 0.1
COL6A1-205ENST00000492851 CCER2I3L3R5 266 aa15.64■□□□□ 0.09
COL6A1-205ENST00000492851 PPP1R12BO60237 982 aaPredicted RBP15.64■□□□□ 0.09
COL6A1-205ENST00000492851 TRPA1O75762 1119 aa15.64■□□□□ 0.09
COL6A1-205ENST00000492851 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
COL6A1-205ENST00000492851 PRAMEF18Q5VWM3 479 aa15.64■□□□□ 0.09
COL6A1-205ENST00000492851 CERS5Q8N5B7 392 aa15.64■□□□□ 0.09
COL6A1-205ENST00000492851 TDRD7Q8NHU6 1098 aaKnown RBP15.64■□□□□ 0.09
COL6A1-205ENST00000492851 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
COL6A1-205ENST00000492851 PAPPA2Q9BXP8 1791 aa15.64■□□□□ 0.09
COL6A1-205ENST00000492851 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL6A1-205ENST00000492851 TRMT2AQ8IZ69 625 aaKnown RBP15.63■□□□□ 0.09
COL6A1-205ENST00000492851 FAM84BQ96KN1 310 aaPredicted RBP15.63■□□□□ 0.09
COL6A1-205ENST00000492851 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
COL6A1-205ENST00000492851 SCAF8Q9UPN6 1271 aaKnown RBP15.63■□□□□ 0.09
COL6A1-205ENST00000492851 POLR2AP24928 1970 aaKnown RBP15.63■□□□□ 0.09
COL6A1-205ENST00000492851 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 F8W031 263 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-205ENST00000492851 PDE8BO95263 885 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 TM4SF4P48230 202 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 INHBEP58166 350 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 SREBF2Q12772 1141 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 DGKZQ13574 1117 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 METTL24Q5JXM2 366 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 MFSD14BQ5SR56 506 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 TBC1D22AQ8WUA7 517 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 PUS3Q9BZE2 481 aaKnown RBP15.62■□□□□ 0.09
COL6A1-205ENST00000492851 MCOLN1Q9GZU1 580 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 USP44Q9H0E7 712 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
COL6A1-205ENST00000492851 CCDC85CA6NKD9 419 aa15.61■□□□□ 0.09
COL6A1-205ENST00000492851 FRAT2O75474 233 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-205ENST00000492851 GYG1P46976 350 aa15.61■□□□□ 0.09
COL6A1-205ENST00000492851 LDLRAD1Q5T700 205 aa15.61■□□□□ 0.09
COL6A1-205ENST00000492851 MOB2Q70IA6 237 aa15.61■□□□□ 0.09
COL6A1-205ENST00000492851 FBXO33Q7Z6M2 555 aa15.61■□□□□ 0.09
COL6A1-205ENST00000492851 PRMT6Q96LA8 375 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-205ENST00000492851 ANGEL1Q9UNK9 670 aaKnown RBP15.61■□□□□ 0.09
COL6A1-205ENST00000492851 HDLBPQ00341 1268 aaKnown RBP15.6■□□□□ 0.09
COL6A1-205ENST00000492851 MAP3K11Q16584 847 aa15.6■□□□□ 0.09
COL6A1-205ENST00000492851 ANKRD44Q8N8A2 993 aa15.6■□□□□ 0.09
COL6A1-205ENST00000492851 SLC10A4Q96EP9 437 aa15.6■□□□□ 0.09
COL6A1-205ENST00000492851 API5Q9BZZ5 524 aaKnown RBP15.6■□□□□ 0.09
COL6A1-205ENST00000492851 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
COL6A1-205ENST00000492851 TTF2Q9UNY4 1162 aaKnown RBP15.6■□□□□ 0.09
COL6A1-205ENST00000492851 KIF16BQ96L93 1317 aa15.6■□□□□ 0.09
COL6A1-205ENST00000492851 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
COL6A1-205ENST00000492851 IFIT1P09914 478 aaKnown RBP15.59■□□□□ 0.09
COL6A1-205ENST00000492851 TNNI2P48788 182 aa15.59■□□□□ 0.09
COL6A1-205ENST00000492851 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
COL6A1-205ENST00000492851 NOM1Q5C9Z4 860 aaKnown RBP15.59■□□□□ 0.09
COL6A1-205ENST00000492851 CDCA7LQ96GN5 454 aa15.59■□□□□ 0.09
COL6A1-205ENST00000492851 MRIQ9BWK5 157 aa15.59■□□□□ 0.09
COL6A1-205ENST00000492851 VEZTQ9HBM0 779 aa15.59■□□□□ 0.09
COL6A1-205ENST00000492851 SUGT1Q9Y2Z0 365 aa15.59■□□□□ 0.09
COL6A1-205ENST00000492851 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
COL6A1-205ENST00000492851 PRKG1Q13976 671 aa15.58■□□□□ 0.08
COL6A1-205ENST00000492851 PUM3Q15397 648 aaKnown RBP15.58■□□□□ 0.08
COL6A1-205ENST00000492851 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
COL6A1-205ENST00000492851 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
COL6A1-205ENST00000492851 ZNF646O15015 1829 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 CLRN2A0PK11 232 aa15.57■□□□□ 0.08
COL6A1-205ENST00000492851 MANSC4A6NHS7 340 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 EYA2O00167 538 aa15.57■□□□□ 0.08
COL6A1-205ENST00000492851 UBTFL1P0CB47 393 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 ZBTB48P10074 688 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 RGS19P49795 217 aa15.57■□□□□ 0.08
COL6A1-205ENST00000492851 RASA3Q14644 834 aa15.57■□□□□ 0.08
COL6A1-205ENST00000492851 PKN2Q16513 984 aaKnown RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 SPRYD7Q5W111 196 aa15.57■□□□□ 0.08
COL6A1-205ENST00000492851 DZIP1LQ8IYY4 767 aaKnown RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
COL6A1-205ENST00000492851 NOB1Q9ULX3 412 aaKnown RBP15.57■□□□□ 0.08
COL6A1-205ENST00000492851 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
COL6A1-205ENST00000492851 CTU1Q7Z7A3 348 aaKnown RBP15.56■□□□□ 0.08
COL6A1-205ENST00000492851 LPIN2Q92539 896 aa15.56■□□□□ 0.08
COL6A1-205ENST00000492851 ARHGAP45Q92619 1136 aa15.56■□□□□ 0.08
COL6A1-205ENST00000492851 CFHR5Q9BXR6 569 aa15.56■□□□□ 0.08
COL6A1-205ENST00000492851 ZNF70Q9UC06 446 aaPredicted RBP15.56■□□□□ 0.08
COL6A1-205ENST00000492851 MAST3O60307 1309 aa15.56■□□□□ 0.08
COL6A1-205ENST00000492851 CIAO1O76071 339 aa15.55■□□□□ 0.08
COL6A1-205ENST00000492851 SLC5A1P13866 664 aa15.55■□□□□ 0.08
COL6A1-205ENST00000492851 CRKP46108 304 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms