RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
CDC42SE1-206ENST00000492796 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
CDC42SE1-206ENST00000492796 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
CDC42SE1-206ENST00000492796 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
CDC42SE1-206ENST00000492796 EGFRP00533 1210 aa13.21□□□□□ -0.29
CDC42SE1-206ENST00000492796 MXD3Q9BW11 206 aa13.21□□□□□ -0.29
CDC42SE1-206ENST00000492796 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
CDC42SE1-206ENST00000492796 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
CDC42SE1-206ENST00000492796 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
CDC42SE1-206ENST00000492796 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 CDC37L1Q7L3B6 337 aa13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 AKAP2Q9Y2D5 859 aa13.2□□□□□ -0.3
CDC42SE1-206ENST00000492796 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 TMEM88BA6NKF7 163 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 ZBTB22O15209 634 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 BCAMP50895 628 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
CDC42SE1-206ENST00000492796 CAPN15O75808 1086 aa13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 TFCP2Q12800 502 aa13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 SCARF1Q14162 830 aa13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 MTMR14Q8NCE2 650 aa13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
CDC42SE1-206ENST00000492796 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 WNT10BO00744 389 aa13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 SEMA3EO15041 775 aa13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 HTRA3P83110 453 aa13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 ANGEL2Q5VTE6 544 aaKnown RBP13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 IQSEC3Q9UPP2 1182 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
CDC42SE1-206ENST00000492796 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 POLR2AP24928 1970 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 TRAF5O00463 557 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 RRP1P56182 461 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 KLRG1Q96E93 195 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
CDC42SE1-206ENST00000492796 MAST3O60307 1309 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 HMMRO75330 724 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 ADORA1P30542 326 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 CCDC102BQ68D86 513 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 TTF2Q9UNY4 1162 aaKnown RBP13.15□□□□□ -0.3
CDC42SE1-206ENST00000492796 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 MYO1BO43795 1136 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 PHKA1P46020 1223 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 TIMM10P62072 90 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 XAGE2Q96GT9 111 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
CDC42SE1-206ENST00000492796 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 RASSF10A6NK89 507 aa13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 FMR1Q06787 632 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 CST9Q5W186 159 aa13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 ABT1Q9ULW3 272 aaKnown RBP13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
CDC42SE1-206ENST00000492796 RBM5P52756 815 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDC42SE1-206ENST00000492796 GORABQ5T7V8 394 aa13.12□□□□□ -0.31
CDC42SE1-206ENST00000492796 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
CDC42SE1-206ENST00000492796 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
CDC42SE1-206ENST00000492796 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
CDC42SE1-206ENST00000492796 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms