RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 PCDHGA4Q9Y5G9 962 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 ATP2B4P23634 1241 aa12.61□□□□□ -0.39
TNFRSF9-203ENST00000492571 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
TNFRSF9-203ENST00000492571 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 UBE2Q2LH0YL09 131 aa12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 TM4SF4P48230 202 aa12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 MMP14P50281 582 aa12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 FBXO46Q6PJ61 603 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 ARMC9Q7Z3E5 817 aa12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 ASTN2O75129 1339 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 XDHP47989 1333 aa12.6□□□□□ -0.39
TNFRSF9-203ENST00000492571 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 GPR25O00155 361 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 PDE8AO60658 829 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 FKTNO75072 461 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 RALBP1Q15311 655 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 KRT24Q2M2I5 525 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 CDC5LQ99459 802 aaKnown RBP12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 MYO3BQ8WXR4 1341 aa12.59□□□□□ -0.39
TNFRSF9-203ENST00000492571 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 MOB2Q70IA6 237 aa12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 MYD88Q99836 296 aa12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 DUOX1Q9NRD9 1551 aa12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 ANKRD36CQ5JPF3 1778 aa12.58□□□□□ -0.4
TNFRSF9-203ENST00000492571 PCCAP05165 728 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 INHBEP58166 350 aa12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 INTS3Q68E01 1043 aaKnown RBP12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 GMLQ99445 158 aa12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
TNFRSF9-203ENST00000492571 CALD1Q05682 793 aaKnown RBP12.56□□□□□ -0.4
TNFRSF9-203ENST00000492571 NBPF9Q3BBW0 867 aa12.56□□□□□ -0.4
TNFRSF9-203ENST00000492571 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
TNFRSF9-203ENST00000492571 APOBEC3FQ8IUX4 373 aaKnown RBP12.56□□□□□ -0.4
TNFRSF9-203ENST00000492571 ZNF609O15014 1411 aa12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 FOXK1P85037 733 aa12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 STRIP1Q5VSL9 837 aa12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
TNFRSF9-203ENST00000492571 DLG5Q8TDM6 1919 aa12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 MANSC4A6NHS7 340 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 WNT10BO00744 389 aa12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 PRKG1Q13976 671 aa12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 OTUD7BQ6GQQ9 843 aa12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF9-203ENST00000492571 AKAP11Q9UKA4 1901 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 DSG2Q14126 1118 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 DACT2Q5SW24 774 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 MINPP1Q9UNW1 487 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 TRIM17Q9Y577 477 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 LRRC37AA6NMS7 1700 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
TNFRSF9-203ENST00000492571 LAMB2P55268 1798 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 MYO1BO43795 1136 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 KCNJ4P48050 445 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 CCT4P50991 539 aaKnown RBP12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 CTSWP56202 376 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 GNAI1P63096 354 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 SUPT20HL1Q3ZLR7 823 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 JARID2Q92833 1246 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 MED23Q9ULK4 1368 aa12.52□□□□□ -0.41
TNFRSF9-203ENST00000492571 SASH1O94885 1247 aa12.51□□□□□ -0.41
TNFRSF9-203ENST00000492571 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
TNFRSF9-203ENST00000492571 DLGAP5Q15398 846 aa12.51□□□□□ -0.41
TNFRSF9-203ENST00000492571 KIAA0825Q8IV33 1275 aa12.51□□□□□ -0.41
TNFRSF9-203ENST00000492571 ERO1AQ96HE7 468 aa12.51□□□□□ -0.41
TNFRSF9-203ENST00000492571 MPHOSPH8Q99549 860 aa12.51□□□□□ -0.41
TNFRSF9-203ENST00000492571 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms