RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CD99L2Q8TCZ2 262 aa17.58■□□□□ 0.4
GPNMB-213ENST00000492512 CD209Q9NNX6 404 aa17.58■□□□□ 0.4
GPNMB-213ENST00000492512 PTPN22Q9Y2R2 807 aa17.58■□□□□ 0.4
GPNMB-213ENST00000492512 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
GPNMB-213ENST00000492512 BRCA2P51587 3418 aa17.57■□□□□ 0.4
GPNMB-213ENST00000492512 UNCXA6NJT0 531 aa17.57■□□□□ 0.4
GPNMB-213ENST00000492512 MYO1BO43795 1136 aa17.57■□□□□ 0.4
GPNMB-213ENST00000492512 EFCC1Q9HA90 598 aa17.57■□□□□ 0.4
GPNMB-213ENST00000492512 CLRN2A0PK11 232 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 IREB2P48200 963 aaKnown RBP17.56■□□□□ 0.4
GPNMB-213ENST00000492512 CHRNDQ07001 517 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 CRHR2Q13324 411 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 PLA2G12BQ9BX93 195 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 VEZTQ9HBM0 779 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
GPNMB-213ENST00000492512 F8W031 263 aaPredicted RBP17.55■□□□□ 0.4
GPNMB-213ENST00000492512 NBPF12Q5TAG4 269 aaPredicted RBP17.55■□□□□ 0.4
GPNMB-213ENST00000492512 CEP290O15078 2479 aa17.55■□□□□ 0.4
GPNMB-213ENST00000492512 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
GPNMB-213ENST00000492512 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
GPNMB-213ENST00000492512 SP3Q02447 781 aa17.54■□□□□ 0.4
GPNMB-213ENST00000492512 GCKRQ14397 625 aa17.54■□□□□ 0.4
GPNMB-213ENST00000492512 CFAP100Q494V2 611 aa17.54■□□□□ 0.4
GPNMB-213ENST00000492512 ARMC5Q96C12 935 aa17.54■□□□□ 0.4
GPNMB-213ENST00000492512 ANKRD18BA2A2Z9 1011 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 SNAP23O00161 211 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 TAF5LO75529 589 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 USP2O75604 605 aaPredicted RBP17.53■□□□□ 0.4
GPNMB-213ENST00000492512 CSF1RP07333 972 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 EN2P19622 333 aaPredicted RBP17.53■□□□□ 0.4
GPNMB-213ENST00000492512 GJA5P36382 358 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 RBM5P52756 815 aaKnown RBP eCLIP17.53■□□□□ 0.4
GPNMB-213ENST00000492512 G2E3Q7L622 706 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
GPNMB-213ENST00000492512 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
GPNMB-213ENST00000492512 PRMT6Q96LA8 375 aaPredicted RBP17.53■□□□□ 0.4
GPNMB-213ENST00000492512 TMEM106CQ9BVX2 250 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 MYH16Q9H6N6 1097 aa17.53■□□□□ 0.4
GPNMB-213ENST00000492512 OTOFQ9HC10 1997 aa17.52■□□□□ 0.4
GPNMB-213ENST00000492512 RASA3Q14644 834 aa17.52■□□□□ 0.4
GPNMB-213ENST00000492512 C15orf52Q6ZUT6 534 aaKnown RBP17.52■□□□□ 0.4
GPNMB-213ENST00000492512 A0A1B0GUL6 1792 aa17.52■□□□□ 0.4
GPNMB-213ENST00000492512 IRS2Q9Y4H2 1338 aa17.51■□□□□ 0.39
GPNMB-213ENST00000492512 TESPA1A2RU30 521 aaPredicted RBP17.51■□□□□ 0.39
GPNMB-213ENST00000492512 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
GPNMB-213ENST00000492512 IL1R1P14778 569 aa17.51■□□□□ 0.39
GPNMB-213ENST00000492512 CASP7P55210 303 aa17.51■□□□□ 0.39
GPNMB-213ENST00000492512 FKBP1AP62942 108 aaKnown RBP17.51■□□□□ 0.39
GPNMB-213ENST00000492512 PTPN18Q99952 460 aa17.51■□□□□ 0.39
GPNMB-213ENST00000492512 TNFAIP1Q13829 316 aa17.5■□□□□ 0.39
GPNMB-213ENST00000492512 ARHGEF6Q15052 776 aa17.5■□□□□ 0.39
GPNMB-213ENST00000492512 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
GPNMB-213ENST00000492512 OPTNQ96CV9 577 aa17.5■□□□□ 0.39
GPNMB-213ENST00000492512 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
GPNMB-213ENST00000492512 JAG2Q9Y219 1238 aa17.5■□□□□ 0.39
GPNMB-213ENST00000492512 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 AOX1Q06278 1338 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 FXR1P51114 621 aaKnown RBP eCLIP17.49■□□□□ 0.39
GPNMB-213ENST00000492512 FLIIQ13045 1269 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
GPNMB-213ENST00000492512 SLC9C1Q4G0N8 1177 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 NBPF11Q86T75 865 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 DNAAF4Q8WXU2 420 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 ZNF333Q96JL9 665 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
GPNMB-213ENST00000492512 CAP1Q01518 475 aa17.48■□□□□ 0.39
GPNMB-213ENST00000492512 FKBP5Q13451 457 aaPredicted RBP17.48■□□□□ 0.39
GPNMB-213ENST00000492512 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
GPNMB-213ENST00000492512 TRIOBPQ9H2D6 2365 aa17.48■□□□□ 0.39
GPNMB-213ENST00000492512 TAF1CQ15572 869 aaPredicted RBP17.47■□□□□ 0.39
GPNMB-213ENST00000492512 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
GPNMB-213ENST00000492512 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
GPNMB-213ENST00000492512 ZFYVE28Q9HCC9 887 aa17.47■□□□□ 0.39
GPNMB-213ENST00000492512 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
GPNMB-213ENST00000492512 PLIN1O60240 522 aa17.46■□□□□ 0.39
GPNMB-213ENST00000492512 CCL15Q16663 113 aa17.46■□□□□ 0.39
GPNMB-213ENST00000492512 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
GPNMB-213ENST00000492512 ZNF70Q9UC06 446 aaPredicted RBP17.46■□□□□ 0.39
GPNMB-213ENST00000492512 PTCH2Q9Y6C5 1203 aa17.46■□□□□ 0.39
GPNMB-213ENST00000492512 GTF2A2P52657 109 aa17.45■□□□□ 0.38
GPNMB-213ENST00000492512 FOXO4P98177 505 aa17.45■□□□□ 0.38
GPNMB-213ENST00000492512 TAF7LQ5H9L4 462 aa17.45■□□□□ 0.38
GPNMB-213ENST00000492512 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
GPNMB-213ENST00000492512 BRI3BPQ8WY22 251 aa17.45■□□□□ 0.38
GPNMB-213ENST00000492512 TDRD3Q9H7E2 651 aaKnown RBP17.45■□□□□ 0.38
GPNMB-213ENST00000492512 SERPINA10Q9UK55 444 aa17.45■□□□□ 0.38
GPNMB-213ENST00000492512 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
GPNMB-213ENST00000492512 COLQQ9Y215 455 aaPredicted RBP17.45■□□□□ 0.38
GPNMB-213ENST00000492512 FAM205AQ6ZU69 1335 aa17.45■□□□□ 0.38
GPNMB-213ENST00000492512 WDHD1O75717 1129 aaPredicted RBP17.44■□□□□ 0.38
GPNMB-213ENST00000492512 MFSD14BQ5SR56 506 aa17.44■□□□□ 0.38
GPNMB-213ENST00000492512 LDHAL6AQ6ZMR3 332 aa17.44■□□□□ 0.38
GPNMB-213ENST00000492512 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
GPNMB-213ENST00000492512 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
GPNMB-213ENST00000492512 CSADQ9Y600 493 aa17.44■□□□□ 0.38
GPNMB-213ENST00000492512 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms