RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 TRIM27P14373 513 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 UBE4AQ14139 1066 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 INTS3Q68E01 1043 aaKnown RBP14.78□□□□□ -0.04
MDC1-207ENST00000492462 VGLL2Q8N8G2 317 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 ARHGAP45Q92619 1136 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 FRAT1Q92837 279 aaPredicted RBP14.78□□□□□ -0.04
MDC1-207ENST00000492462 FAM84BQ96KN1 310 aaPredicted RBP14.78□□□□□ -0.04
MDC1-207ENST00000492462 CAPNS2Q96L46 248 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 PTPN12Q05209 780 aaKnown RBP14.77□□□□□ -0.05
MDC1-207ENST00000492462 METTL24Q5JXM2 366 aa14.77□□□□□ -0.05
MDC1-207ENST00000492462 SULF1Q8IWU6 871 aa14.77□□□□□ -0.05
MDC1-207ENST00000492462 CLUAP1Q96AJ1 413 aa14.77□□□□□ -0.05
MDC1-207ENST00000492462 PCDHAC2Q9Y5I4 1007 aa14.77□□□□□ -0.05
MDC1-207ENST00000492462 F8W031 263 aaPredicted RBP14.76□□□□□ -0.05
MDC1-207ENST00000492462 EYA2O00167 538 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 WNT10BO00744 389 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 AOC2O75106 756 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 HIBADHP31937 336 aaKnown RBP14.76□□□□□ -0.05
MDC1-207ENST00000492462 PRAMEF18Q5VWM3 479 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 TDRD7Q8NHU6 1098 aaKnown RBP14.76□□□□□ -0.05
MDC1-207ENST00000492462 CDCA5Q96FF9 252 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 ZBED3Q96IU2 234 aaPredicted RBP14.76□□□□□ -0.05
MDC1-207ENST00000492462 MCOLN1Q9GZU1 580 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 IQSEC3Q9UPP2 1182 aaPredicted RBP14.76□□□□□ -0.05
MDC1-207ENST00000492462 THSD7BQ9C0I4 1608 aa14.76□□□□□ -0.05
MDC1-207ENST00000492462 AOX1Q06278 1338 aa14.75□□□□□ -0.05
MDC1-207ENST00000492462 ZBED9Q6R2W3 1325 aa14.75□□□□□ -0.05
MDC1-207ENST00000492462 PDE8BO95263 885 aa14.75□□□□□ -0.05
MDC1-207ENST00000492462 ATF7IPQ6VMQ6 1270 aa14.75□□□□□ -0.05
MDC1-207ENST00000492462 FBXO33Q7Z6M2 555 aa14.75□□□□□ -0.05
MDC1-207ENST00000492462 SIL1Q9H173 461 aa14.75□□□□□ -0.05
MDC1-207ENST00000492462 GBA2Q9HCG7 927 aaPredicted RBP14.75□□□□□ -0.05
MDC1-207ENST00000492462 PA2G4Q9UQ80 394 aaKnown RBP14.75□□□□□ -0.05
MDC1-207ENST00000492462 FAM205AQ6ZU69 1335 aa14.74□□□□□ -0.05
MDC1-207ENST00000492462 HUNKP57058 714 aa14.74□□□□□ -0.05
MDC1-207ENST00000492462 ZIC5Q96T25 663 aa14.74□□□□□ -0.05
MDC1-207ENST00000492462 PITPNM2Q9BZ72 1349 aa14.73□□□□□ -0.05
MDC1-207ENST00000492462 IPO8O15397 1037 aaKnown RBP14.73□□□□□ -0.05
MDC1-207ENST00000492462 FGFR2P21802 821 aa14.73□□□□□ -0.05
MDC1-207ENST00000492462 ECE1P42892 770 aa14.73□□□□□ -0.05
MDC1-207ENST00000492462 BCAMP50895 628 aa14.73□□□□□ -0.05
MDC1-207ENST00000492462 GRIK5Q16478 980 aa14.73□□□□□ -0.05
MDC1-207ENST00000492462 HDAC9Q9UKV0 1011 aa14.73□□□□□ -0.05
MDC1-207ENST00000492462 ARAP2Q8WZ64 1704 aa14.72□□□□□ -0.05
MDC1-207ENST00000492462 ECM29Q5VYK3 1845 aa14.72□□□□□ -0.05
MDC1-207ENST00000492462 FKBP1AP62942 108 aaKnown RBP14.72□□□□□ -0.05
MDC1-207ENST00000492462 MFSD14BQ5SR56 506 aa14.72□□□□□ -0.05
MDC1-207ENST00000492462 MOB2Q70IA6 237 aa14.72□□□□□ -0.05
MDC1-207ENST00000492462 TMEM57Q8N5G2 664 aa14.72□□□□□ -0.05
MDC1-207ENST00000492462 HHIPL1Q96JK4 782 aa14.72□□□□□ -0.05
MDC1-207ENST00000492462 CHAF1AQ13111 956 aaPredicted RBP14.71□□□□□ -0.05
MDC1-207ENST00000492462 PUM3Q15397 648 aaKnown RBP14.71□□□□□ -0.05
MDC1-207ENST00000492462 DLGAP5Q15398 846 aa14.71□□□□□ -0.05
MDC1-207ENST00000492462 CFAP100Q494V2 611 aa14.71□□□□□ -0.05
MDC1-207ENST00000492462 ZKSCAN2Q63HK3 967 aa14.71□□□□□ -0.05
MDC1-207ENST00000492462 C2orf69Q8N8R5 385 aa14.71□□□□□ -0.05
MDC1-207ENST00000492462 PRMT6Q96LA8 375 aaPredicted RBP14.71□□□□□ -0.05
MDC1-207ENST00000492462 BEGAINQ9BUH8 593 aa14.71□□□□□ -0.05
MDC1-207ENST00000492462 CLRN2A0PK11 232 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 CIAO1O76071 339 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 GNAI3P08754 354 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 MMP14P50281 582 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 VPS37DQ86XT2 251 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 MTMR14Q8NCE2 650 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 COPRSQ9NQ92 184 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 TTF2Q9UNY4 1162 aaKnown RBP14.7□□□□□ -0.06
MDC1-207ENST00000492462 MYH13Q9UKX3 1938 aa14.7□□□□□ -0.06
MDC1-207ENST00000492462 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 FAM155AB1AL88 458 aaPredicted RBP14.69□□□□□ -0.06
MDC1-207ENST00000492462 IFIT1P09914 478 aaKnown RBP14.69□□□□□ -0.06
MDC1-207ENST00000492462 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 RLBP1P12271 317 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 CAVIN4Q5BKX8 364 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 RGMBQ6NW40 437 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 LPIN2Q92539 896 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.69□□□□□ -0.06
MDC1-207ENST00000492462 PAPPA2Q9BXP8 1791 aa14.69□□□□□ -0.06
MDC1-207ENST00000492462 COL1A1P02452 1464 aaPredicted RBP14.69□□□□□ -0.06
MDC1-207ENST00000492462 SRGAP3O43295 1099 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 SLC5A1P13866 664 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 MAP2K2P36507 400 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 RBM5P52756 815 aaKnown RBP eCLIP14.68□□□□□ -0.06
MDC1-207ENST00000492462 MTX1Q13505 466 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 TSKSQ9UJT2 592 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 FZD1Q9UP38 647 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 HDAC5Q9UQL6 1122 aa14.68□□□□□ -0.06
MDC1-207ENST00000492462 PNMA6EA0A0J9YXQ4 647 aa14.67□□□□□ -0.06
MDC1-207ENST00000492462 UBE2Q2LH0YL09 131 aa14.67□□□□□ -0.06
MDC1-207ENST00000492462 FRAT2O75474 233 aaPredicted RBP14.67□□□□□ -0.06
MDC1-207ENST00000492462 GNAI2P04899 355 aa14.67□□□□□ -0.06
MDC1-207ENST00000492462 ADORA1P30542 326 aa14.67□□□□□ -0.06
MDC1-207ENST00000492462 IL15P40933 162 aaPredicted RBP14.67□□□□□ -0.06
MDC1-207ENST00000492462 ZNF157P51786 506 aaPredicted RBP14.67□□□□□ -0.06
MDC1-207ENST00000492462 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
MDC1-207ENST00000492462 CRKP46108 304 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms