RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 TRIM17Q9Y577 477 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 PPP1R12BO60237 982 aaPredicted RBP15.95■□□□□ 0.14
TREX1-204ENST00000492235 INHBEP58166 350 aa15.95■□□□□ 0.14
TREX1-204ENST00000492235 FKBP5Q13451 457 aaPredicted RBP15.95■□□□□ 0.14
TREX1-204ENST00000492235 MAP3K11Q16584 847 aa15.95■□□□□ 0.14
TREX1-204ENST00000492235 MTMR14Q8NCE2 650 aa15.95■□□□□ 0.14
TREX1-204ENST00000492235 DNAAF4Q8WXU2 420 aa15.95■□□□□ 0.14
TREX1-204ENST00000492235 JAG2Q9Y219 1238 aa15.95■□□□□ 0.14
TREX1-204ENST00000492235 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 IGF2BP3O00425 579 aaKnown RBP eCLIP15.94■□□□□ 0.14
TREX1-204ENST00000492235 MYO1BO43795 1136 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 ZBTB48P10074 688 aaPredicted RBP15.94■□□□□ 0.14
TREX1-204ENST00000492235 CFAP100Q494V2 611 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 OTOP1Q7RTM1 612 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 LINS1Q8NG48 757 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 VEZTQ9HBM0 779 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 CHMP3Q9Y3E7 222 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 PPP2R3BQ9Y5P8 575 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 LAMB1P07942 1786 aa15.94■□□□□ 0.14
TREX1-204ENST00000492235 SPDYE2BA6NHP3 402 aa15.93■□□□□ 0.14
TREX1-204ENST00000492235 SPDYE6P0CI01 402 aa15.93■□□□□ 0.14
TREX1-204ENST00000492235 SUPT20HL1Q3ZLR7 823 aa15.93■□□□□ 0.14
TREX1-204ENST00000492235 NBPF12Q5TAG4 269 aaPredicted RBP15.93■□□□□ 0.14
TREX1-204ENST00000492235 C15orf52Q6ZUT6 534 aaKnown RBP15.93■□□□□ 0.14
TREX1-204ENST00000492235 ZNF804AQ7Z570 1209 aa15.93■□□□□ 0.14
TREX1-204ENST00000492235 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
TREX1-204ENST00000492235 PRMT6Q96LA8 375 aaPredicted RBP15.93■□□□□ 0.14
TREX1-204ENST00000492235 AOX1Q06278 1338 aa15.93■□□□□ 0.14
TREX1-204ENST00000492235 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
TREX1-204ENST00000492235 IL1R1P14778 569 aa15.92■□□□□ 0.14
TREX1-204ENST00000492235 RBM5P52756 815 aaKnown RBP eCLIP15.92■□□□□ 0.14
TREX1-204ENST00000492235 FOXO4P98177 505 aa15.92■□□□□ 0.14
TREX1-204ENST00000492235 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
TREX1-204ENST00000492235 CCDC27Q2M243 656 aa15.92■□□□□ 0.14
TREX1-204ENST00000492235 PLIN1O60240 522 aa15.91■□□□□ 0.14
TREX1-204ENST00000492235 GJA5P36382 358 aa15.91■□□□□ 0.14
TREX1-204ENST00000492235 IREB2P48200 963 aaKnown RBP15.91■□□□□ 0.14
TREX1-204ENST00000492235 CCDC184Q52MB2 194 aa15.91■□□□□ 0.14
TREX1-204ENST00000492235 CD99L2Q8TCZ2 262 aa15.91■□□□□ 0.14
TREX1-204ENST00000492235 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
TREX1-204ENST00000492235 OTOFQ9HC10 1997 aa15.9■□□□□ 0.14
TREX1-204ENST00000492235 USP2O75604 605 aaPredicted RBP15.9■□□□□ 0.14
TREX1-204ENST00000492235 FKBP1AP62942 108 aaKnown RBP15.9■□□□□ 0.14
TREX1-204ENST00000492235 CRHR2Q13324 411 aa15.9■□□□□ 0.14
TREX1-204ENST00000492235 RASA3Q14644 834 aa15.9■□□□□ 0.14
TREX1-204ENST00000492235 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
TREX1-204ENST00000492235 GCC1Q96CN9 775 aa15.9■□□□□ 0.14
TREX1-204ENST00000492235 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
TREX1-204ENST00000492235 ZNF594Q96JF6 807 aaPredicted RBP15.9■□□□□ 0.14
TREX1-204ENST00000492235 HTTP42858 3142 aa15.9■□□□□ 0.14
TREX1-204ENST00000492235 UNCXA6NJT0 531 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 F6X3S4 739 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 OTUD7BQ6GQQ9 843 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 ANKRD13AQ8IZ07 590 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 IL16Q14005 1332 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.13
TREX1-204ENST00000492235 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
TREX1-204ENST00000492235 TAF7LQ5H9L4 462 aa15.88■□□□□ 0.13
TREX1-204ENST00000492235 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
TREX1-204ENST00000492235 PTPN18Q99952 460 aa15.88■□□□□ 0.13
TREX1-204ENST00000492235 ELP3Q9H9T3 547 aa15.88■□□□□ 0.13
TREX1-204ENST00000492235 EFCC1Q9HA90 598 aa15.88■□□□□ 0.13
TREX1-204ENST00000492235 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
TREX1-204ENST00000492235 VAMP4O75379 141 aa15.87■□□□□ 0.13
TREX1-204ENST00000492235 SP3Q02447 781 aa15.87■□□□□ 0.13
TREX1-204ENST00000492235 CCDC57Q2TAC2 916 aa15.87■□□□□ 0.13
TREX1-204ENST00000492235 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
TREX1-204ENST00000492235 LDHAL6AQ6ZMR3 332 aa15.87■□□□□ 0.13
TREX1-204ENST00000492235 OPTNQ96CV9 577 aa15.87■□□□□ 0.13
TREX1-204ENST00000492235 CENPFP49454 3210 aa15.86■□□□□ 0.13
TREX1-204ENST00000492235 TESPA1A2RU30 521 aaPredicted RBP15.86■□□□□ 0.13
TREX1-204ENST00000492235 CAP1Q01518 475 aa15.86■□□□□ 0.13
TREX1-204ENST00000492235 TNFAIP1Q13829 316 aa15.86■□□□□ 0.13
TREX1-204ENST00000492235 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
TREX1-204ENST00000492235 HABP4Q5JVS0 413 aaKnown RBP15.86■□□□□ 0.13
TREX1-204ENST00000492235 MFSD14BQ5SR56 506 aa15.86■□□□□ 0.13
TREX1-204ENST00000492235 CDAN1Q8IWY9 1227 aa15.86■□□□□ 0.13
TREX1-204ENST00000492235 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
TREX1-204ENST00000492235 ZNF70Q9UC06 446 aaPredicted RBP15.86■□□□□ 0.13
TREX1-204ENST00000492235 TTF2Q9UNY4 1162 aaKnown RBP15.86■□□□□ 0.13
TREX1-204ENST00000492235 EN2P19622 333 aaPredicted RBP15.85■□□□□ 0.13
TREX1-204ENST00000492235 GYG1P46976 350 aa15.85■□□□□ 0.13
TREX1-204ENST00000492235 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
TREX1-204ENST00000492235 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
TREX1-204ENST00000492235 ARMC5Q96C12 935 aa15.85■□□□□ 0.13
TREX1-204ENST00000492235 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
TREX1-204ENST00000492235 MKI67P46013 3256 aaKnown RBP15.85■□□□□ 0.13
TREX1-204ENST00000492235 FAM205AQ6ZU69 1335 aa15.85■□□□□ 0.13
TREX1-204ENST00000492235 ARAP2Q8WZ64 1704 aa15.85■□□□□ 0.13
TREX1-204ENST00000492235 TCP10L2B9ZVM9 353 aa15.84■□□□□ 0.13
TREX1-204ENST00000492235 GRM8O00222 908 aa15.84■□□□□ 0.13
TREX1-204ENST00000492235 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
TREX1-204ENST00000492235 MS4A4AQ96JQ5 239 aa15.84■□□□□ 0.13
TREX1-204ENST00000492235 SERPINA10Q9UK55 444 aa15.84■□□□□ 0.13
TREX1-204ENST00000492235 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.12
TREX1-204ENST00000492235 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.83■□□□□ 0.12
TREX1-204ENST00000492235 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms