RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 RFX5P48382 616 aaPredicted RBP18.78■□□□□ 0.6
TOM1-215ENST00000491987 VGLL2Q8N8G2 317 aa18.78■□□□□ 0.6
TOM1-215ENST00000491987 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
TOM1-215ENST00000491987 PDE8BO95263 885 aa18.77■□□□□ 0.6
TOM1-215ENST00000491987 MAP2K2P36507 400 aa18.77■□□□□ 0.6
TOM1-215ENST00000491987 TNS4Q8IZW8 715 aa18.77■□□□□ 0.6
TOM1-215ENST00000491987 TDRD7Q8NHU6 1098 aaKnown RBP18.77■□□□□ 0.6
TOM1-215ENST00000491987 ARHGAP45Q92619 1136 aa18.77■□□□□ 0.6
TOM1-215ENST00000491987 MEIS3Q99687 375 aa18.77■□□□□ 0.6
TOM1-215ENST00000491987 LRRFIP2Q9Y608 721 aaKnown RBP18.77■□□□□ 0.6
TOM1-215ENST00000491987 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
TOM1-215ENST00000491987 EYA2O00167 538 aa18.76■□□□□ 0.59
TOM1-215ENST00000491987 BCAR3O75815 825 aa18.76■□□□□ 0.59
TOM1-215ENST00000491987 FKBP1AP62942 108 aaKnown RBP18.76■□□□□ 0.59
TOM1-215ENST00000491987 PTPN12Q05209 780 aaKnown RBP18.76■□□□□ 0.59
TOM1-215ENST00000491987 DLGAP5Q15398 846 aa18.76■□□□□ 0.59
TOM1-215ENST00000491987 PRAMEF18Q5VWM3 479 aa18.76■□□□□ 0.59
TOM1-215ENST00000491987 RGMBQ6NW40 437 aa18.76■□□□□ 0.59
TOM1-215ENST00000491987 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
TOM1-215ENST00000491987 ZBED3Q96IU2 234 aaPredicted RBP18.76■□□□□ 0.59
TOM1-215ENST00000491987 HSPA8P11142 646 aaKnown RBP18.75■□□□□ 0.59
TOM1-215ENST00000491987 LBX1P52954 281 aa18.75■□□□□ 0.59
TOM1-215ENST00000491987 VPS37DQ86XT2 251 aa18.75■□□□□ 0.59
TOM1-215ENST00000491987 IQSEC3Q9UPP2 1182 aaPredicted RBP18.75■□□□□ 0.59
TOM1-215ENST00000491987 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
TOM1-215ENST00000491987 PCDHAC2Q9Y5I4 1007 aa18.75■□□□□ 0.59
TOM1-215ENST00000491987 PAPPA2Q9BXP8 1791 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 ZNF157P51786 506 aaPredicted RBP18.74■□□□□ 0.59
TOM1-215ENST00000491987 NOGQ13253 232 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 CFAP100Q494V2 611 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 MFSD14BQ5SR56 506 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 INTS3Q68E01 1043 aaKnown RBP18.74■□□□□ 0.59
TOM1-215ENST00000491987 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 APOBEC3FQ8IUX4 373 aaKnown RBP18.74■□□□□ 0.59
TOM1-215ENST00000491987 BEGAINQ9BUH8 593 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
TOM1-215ENST00000491987 FAM155AB1AL88 458 aaPredicted RBP18.73■□□□□ 0.59
TOM1-215ENST00000491987 IPO8O15397 1037 aaKnown RBP18.73■□□□□ 0.59
TOM1-215ENST00000491987 TRIM27P14373 513 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 PUM3Q15397 648 aaKnown RBP18.73■□□□□ 0.59
TOM1-215ENST00000491987 CAVIN4Q5BKX8 364 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 ATF7IPQ6VMQ6 1270 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 MTMR14Q8NCE2 650 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 ZIC5Q96T25 663 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 SIL1Q9H173 461 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 HDAC5Q9UQL6 1122 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 ARAP2Q8WZ64 1704 aa18.73■□□□□ 0.59
TOM1-215ENST00000491987 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
TOM1-215ENST00000491987 FGFR2P21802 821 aa18.72■□□□□ 0.59
TOM1-215ENST00000491987 FKBP1BP68106 108 aa18.72■□□□□ 0.59
TOM1-215ENST00000491987 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
TOM1-215ENST00000491987 MOB2Q70IA6 237 aa18.72■□□□□ 0.59
TOM1-215ENST00000491987 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
TOM1-215ENST00000491987 CLRN2A0PK11 232 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 FRAT2O75474 233 aaPredicted RBP18.71■□□□□ 0.59
TOM1-215ENST00000491987 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 BCAMP50895 628 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 RBM5P52756 815 aaKnown RBP eCLIP18.71■□□□□ 0.59
TOM1-215ENST00000491987 CCDC102AQ96A19 550 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 CLUAP1Q96AJ1 413 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 TSKSQ9UJT2 592 aa18.71■□□□□ 0.59
TOM1-215ENST00000491987 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
TOM1-215ENST00000491987 PA2G4Q9UQ80 394 aaKnown RBP18.71■□□□□ 0.59
TOM1-215ENST00000491987 UBE2Q2LH0YL09 131 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 GNAI3P08754 354 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 SLC10A3P09131 477 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 SLC5A1P13866 664 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 NF2P35240 595 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 TTLL12Q14166 644 aaPredicted RBP18.7■□□□□ 0.58
TOM1-215ENST00000491987 LPIN2Q92539 896 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 PRMT6Q96LA8 375 aaPredicted RBP18.7■□□□□ 0.58
TOM1-215ENST00000491987 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
TOM1-215ENST00000491987 AOX1Q06278 1338 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 ECM29Q5VYK3 1845 aa18.7■□□□□ 0.58
TOM1-215ENST00000491987 MYO1BO43795 1136 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 CIAO1O76071 339 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
TOM1-215ENST00000491987 GRIK5Q16478 980 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 RASAL3Q86YV0 1011 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 DEFB129Q9H1M3 183 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 VEZTQ9HBM0 779 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 FBXO3Q9UK99 471 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 ZBED9Q6R2W3 1325 aa18.69■□□□□ 0.58
TOM1-215ENST00000491987 PRKG1Q13976 671 aa18.68■□□□□ 0.58
TOM1-215ENST00000491987 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
TOM1-215ENST00000491987 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
TOM1-215ENST00000491987 SERPINA10Q9UK55 444 aa18.68■□□□□ 0.58
TOM1-215ENST00000491987 IL15P40933 162 aaPredicted RBP18.67■□□□□ 0.58
TOM1-215ENST00000491987 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
TOM1-215ENST00000491987 TBC1D22AQ8WUA7 517 aa18.67■□□□□ 0.58
TOM1-215ENST00000491987 COPRSQ9NQ92 184 aa18.67■□□□□ 0.58
TOM1-215ENST00000491987 SRGAP3O43295 1099 aa18.66■□□□□ 0.58
TOM1-215ENST00000491987 CA12O43570 354 aa18.66■□□□□ 0.58
TOM1-215ENST00000491987 CAPN15O75808 1086 aa18.66■□□□□ 0.58
TOM1-215ENST00000491987 CRKP46108 304 aa18.66■□□□□ 0.58
TOM1-215ENST00000491987 TMEM57Q8N5G2 664 aa18.66■□□□□ 0.58
TOM1-215ENST00000491987 PPP2R3BQ9Y5P8 575 aa18.66■□□□□ 0.58
TOM1-215ENST00000491987 SSC5DA1L4H1 1573 aa18.65■□□□□ 0.58
TOM1-215ENST00000491987 MTX1Q13505 466 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms