RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SSH3Q8TE77 659 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 JAG2Q9Y219 1238 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 RPS12P25398 132 aaKnown RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 IL15P40933 162 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 STRIP1Q5VSL9 837 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 FBXO33Q7Z6M2 555 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 ZBTB40Q9NUA8 1239 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 BCAMP50895 628 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 PUM3Q15397 648 aaKnown RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 CERS5Q8N5B7 392 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 AGBL3Q8NEM8 1001 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 BRPF3Q9ULD4 1205 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 DDX19BQ9UMR2 479 aa11.55□□□□□ -0.56
BRCA1-219ENST00000491747 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-219ENST00000491747 H7C1D1 291 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-219ENST00000491747 HSPA6P17066 643 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 TFCP2Q12800 502 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-219ENST00000491747 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
BRCA1-219ENST00000491747 FRAT2O75474 233 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-219ENST00000491747 SASH1O94885 1247 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 AAMPQ13685 434 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 BECN1Q14457 450 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 LPIN2Q92539 896 aa11.54□□□□□ -0.56
BRCA1-219ENST00000491747 ZNF280AP59817 542 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-219ENST00000491747 TIMM10P62072 90 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 FMR1Q06787 632 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRCA1-219ENST00000491747 ATP2B3Q16720 1220 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 IGHDP01880 384 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 IFIT1P09914 478 aaKnown RBP11.53□□□□□ -0.56
BRCA1-219ENST00000491747 SLC5A1P13866 664 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 ADORA1P30542 326 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 HTRA3P83110 453 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 CNTROBQ8N137 903 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 PGAP2Q9UHJ9 254 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 ASTN2O75129 1339 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-219ENST00000491747 PASKQ96RG2 1323 aa11.53□□□□□ -0.56
BRCA1-219ENST00000491747 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 CAVIN4Q5BKX8 364 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 FAM205AQ6ZU69 1335 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 COL1A1P02452 1464 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-219ENST00000491747 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.57
BRCA1-219ENST00000491747 GRIK5Q16478 980 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 KIF4BQ2VIQ3 1234 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 DLK2Q6UY11 383 aa11.52□□□□□ -0.57
BRCA1-219ENST00000491747 TRPM7Q96QT4 1865 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 SURF6O75683 361 aaKnown RBP11.51□□□□□ -0.57
BRCA1-219ENST00000491747 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 MYOZ2Q9NPC6 264 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 MYO3BQ8WXR4 1341 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 ECM29Q5VYK3 1845 aa11.51□□□□□ -0.57
BRCA1-219ENST00000491747 TRAF5O00463 557 aa11.5□□□□□ -0.57
BRCA1-219ENST00000491747 PHKA1P46020 1223 aa11.5□□□□□ -0.57
BRCA1-219ENST00000491747 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
BRCA1-219ENST00000491747 F8W031 263 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-219ENST00000491747 APLP1P51693 650 aa11.5□□□□□ -0.57
BRCA1-219ENST00000491747 FKBP1AP62942 108 aaKnown RBP11.5□□□□□ -0.57
BRCA1-219ENST00000491747 CHAF1AQ13111 956 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-219ENST00000491747 XAGE2Q96GT9 111 aa11.5□□□□□ -0.57
BRCA1-219ENST00000491747 GLIS2Q9BZE0 524 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-219ENST00000491747 SCARF1Q14162 830 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 NBPF9Q3BBW0 867 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 MFSD14BQ5SR56 506 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 RPAP2Q8IXW5 612 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-219ENST00000491747 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
BRCA1-219ENST00000491747 EXOC6BQ9Y2D4 811 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 NEUROD6Q96NK8 337 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 SCAF8Q9UPN6 1271 aaKnown RBP11.49□□□□□ -0.57
BRCA1-219ENST00000491747 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
BRCA1-219ENST00000491747 CEP350Q5VT06 3117 aa11.48□□□□□ -0.57
BRCA1-219ENST00000491747 AOX1Q06278 1338 aa11.48□□□□□ -0.57
BRCA1-219ENST00000491747 ZBED3Q96IU2 234 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-219ENST00000491747 WNT10BO00744 389 aa11.48□□□□□ -0.57
BRCA1-219ENST00000491747 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-219ENST00000491747 USP48Q86UV5 1035 aa11.48□□□□□ -0.57
BRCA1-219ENST00000491747 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
BRCA1-219ENST00000491747 GGA3Q9NZ52 723 aa11.48□□□□□ -0.57
BRCA1-219ENST00000491747 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 TNNI3KQ59H18 835 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 ANGEL2Q5VTE6 544 aaKnown RBP11.47□□□□□ -0.57
BRCA1-219ENST00000491747 CST9Q5W186 159 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 CHMP4BQ9H444 224 aaKnown RBP11.47□□□□□ -0.57
BRCA1-219ENST00000491747 FPGT-TNNI3KV9GXZ4 949 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 GPR108Q9NPR9 543 aa11.47□□□□□ -0.57
BRCA1-219ENST00000491747 HDAC9Q9UKV0 1011 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms