RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
USF1-206ENST00000491629 IGHMBP2P38935 993 aaKnown RBP16.99■□□□□ 0.31
USF1-206ENST00000491629 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
USF1-206ENST00000491629 SLC10A4Q96EP9 437 aa16.99■□□□□ 0.31
USF1-206ENST00000491629 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
USF1-206ENST00000491629 TRIM17Q9Y577 477 aa16.99■□□□□ 0.31
USF1-206ENST00000491629 MANSC4A6NHS7 340 aaPredicted RBP16.98■□□□□ 0.31
USF1-206ENST00000491629 TAF5LO75529 589 aa16.98■□□□□ 0.31
USF1-206ENST00000491629 ALDH1A1P00352 501 aa16.98■□□□□ 0.31
USF1-206ENST00000491629 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
USF1-206ENST00000491629 NBPF12Q5TAG4 269 aaPredicted RBP16.98■□□□□ 0.31
USF1-206ENST00000491629 HELBQ8NG08 1087 aaPredicted RBP16.98■□□□□ 0.31
USF1-206ENST00000491629 PRMT6Q96LA8 375 aaPredicted RBP16.98■□□□□ 0.31
USF1-206ENST00000491629 PTPN18Q99952 460 aa16.98■□□□□ 0.31
USF1-206ENST00000491629 ANKRD2Q9GZV1 360 aa16.98■□□□□ 0.31
USF1-206ENST00000491629 CLRN2A0PK11 232 aa16.97■□□□□ 0.31
USF1-206ENST00000491629 ZBTB48P10074 688 aaPredicted RBP16.97■□□□□ 0.31
USF1-206ENST00000491629 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
USF1-206ENST00000491629 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 F8W031 263 aaPredicted RBP16.96■□□□□ 0.31
USF1-206ENST00000491629 USP2O75604 605 aaPredicted RBP16.96■□□□□ 0.31
USF1-206ENST00000491629 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 INHBEP58166 350 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 CRHR2Q13324 411 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 CFAP100Q494V2 611 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 HABP4Q5JVS0 413 aaKnown RBP16.96■□□□□ 0.31
USF1-206ENST00000491629 C15orf52Q6ZUT6 534 aaKnown RBP16.96■□□□□ 0.31
USF1-206ENST00000491629 CD99L2Q8TCZ2 262 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 MPHOSPH8Q99549 860 aa16.96■□□□□ 0.31
USF1-206ENST00000491629 IL1R1P14778 569 aa16.95■□□□□ 0.3
USF1-206ENST00000491629 FOXO4P98177 505 aa16.95■□□□□ 0.3
USF1-206ENST00000491629 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
USF1-206ENST00000491629 JAG2Q9Y219 1238 aa16.95■□□□□ 0.3
USF1-206ENST00000491629 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
USF1-206ENST00000491629 TRIOBPQ9H2D6 2365 aa16.94■□□□□ 0.3
USF1-206ENST00000491629 FLIIQ13045 1269 aa16.94■□□□□ 0.3
USF1-206ENST00000491629 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
USF1-206ENST00000491629 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
USF1-206ENST00000491629 CDAN1Q8IWY9 1227 aa16.94■□□□□ 0.3
USF1-206ENST00000491629 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
USF1-206ENST00000491629 PPP2R3BQ9Y5P8 575 aa16.94■□□□□ 0.3
USF1-206ENST00000491629 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
USF1-206ENST00000491629 PPP1R12BO60237 982 aaPredicted RBP16.93■□□□□ 0.3
USF1-206ENST00000491629 EN2P19622 333 aaPredicted RBP16.93■□□□□ 0.3
USF1-206ENST00000491629 KCNJ4P48050 445 aa16.93■□□□□ 0.3
USF1-206ENST00000491629 DNAAF4Q8WXU2 420 aa16.93■□□□□ 0.3
USF1-206ENST00000491629 ARMC5Q96C12 935 aa16.93■□□□□ 0.3
USF1-206ENST00000491629 RANBP2P49792 3224 aaKnown RBP16.92■□□□□ 0.3
USF1-206ENST00000491629 UNCXA6NJT0 531 aa16.92■□□□□ 0.3
USF1-206ENST00000491629 RASA3Q14644 834 aa16.92■□□□□ 0.3
USF1-206ENST00000491629 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
USF1-206ENST00000491629 INTS3Q68E01 1043 aaKnown RBP16.92■□□□□ 0.3
USF1-206ENST00000491629 LINS1Q8NG48 757 aa16.92■□□□□ 0.3
USF1-206ENST00000491629 MS4A4AQ96JQ5 239 aa16.92■□□□□ 0.3
USF1-206ENST00000491629 VEZTQ9HBM0 779 aa16.92■□□□□ 0.3
USF1-206ENST00000491629 ANKRD18BA2A2Z9 1011 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 FKBP1AP62942 108 aaKnown RBP16.91■□□□□ 0.3
USF1-206ENST00000491629 SUPT20HL1Q3ZLR7 823 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 ERO1AQ96HE7 468 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
USF1-206ENST00000491629 TEPSINQ96N21 525 aa16.91■□□□□ 0.3
USF1-206ENST00000491629 IREB2P48200 963 aaKnown RBP16.9■□□□□ 0.3
USF1-206ENST00000491629 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
USF1-206ENST00000491629 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
USF1-206ENST00000491629 EFCC1Q9HA90 598 aa16.9■□□□□ 0.3
USF1-206ENST00000491629 SP3Q02447 781 aa16.89■□□□□ 0.29
USF1-206ENST00000491629 FKBP5Q13451 457 aaPredicted RBP16.89■□□□□ 0.29
USF1-206ENST00000491629 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
USF1-206ENST00000491629 SPDYE2Q495Y8 402 aa16.89■□□□□ 0.29
USF1-206ENST00000491629 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.29
USF1-206ENST00000491629 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
USF1-206ENST00000491629 ANKRD13AQ8IZ07 590 aa16.89■□□□□ 0.29
USF1-206ENST00000491629 ZNF70Q9UC06 446 aaPredicted RBP16.89■□□□□ 0.29
USF1-206ENST00000491629 F6X3S4 739 aa16.88■□□□□ 0.29
USF1-206ENST00000491629 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
USF1-206ENST00000491629 OPTNQ96CV9 577 aa16.88■□□□□ 0.29
USF1-206ENST00000491629 ZNF333Q96JL9 665 aa16.88■□□□□ 0.29
USF1-206ENST00000491629 FAM205AQ6ZU69 1335 aa16.88■□□□□ 0.29
USF1-206ENST00000491629 MYO1BO43795 1136 aa16.87■□□□□ 0.29
USF1-206ENST00000491629 VAMP4O75379 141 aa16.87■□□□□ 0.29
USF1-206ENST00000491629 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.29
USF1-206ENST00000491629 IFIT5Q13325 482 aaKnown RBP16.87■□□□□ 0.29
USF1-206ENST00000491629 GRIK5Q16478 980 aa16.87■□□□□ 0.29
USF1-206ENST00000491629 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
USF1-206ENST00000491629 LMBR1LQ6UX01 489 aa16.87■□□□□ 0.29
USF1-206ENST00000491629 TDRD7Q8NHU6 1098 aaKnown RBP16.87■□□□□ 0.29
USF1-206ENST00000491629 TDRD3Q9H7E2 651 aaKnown RBP16.87■□□□□ 0.29
USF1-206ENST00000491629 PLIN1O60240 522 aa16.86■□□□□ 0.29
USF1-206ENST00000491629 RBM5P52756 815 aaKnown RBP eCLIP16.86■□□□□ 0.29
USF1-206ENST00000491629 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
USF1-206ENST00000491629 TMEM39BQ9GZU3 492 aa16.86■□□□□ 0.29
USF1-206ENST00000491629 PTCH2Q9Y6C5 1203 aa16.86■□□□□ 0.29
USF1-206ENST00000491629 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
USF1-206ENST00000491629 GYG1P46976 350 aa16.85■□□□□ 0.29
USF1-206ENST00000491629 VGLL4Q14135 290 aa16.85■□□□□ 0.29
USF1-206ENST00000491629 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms