RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 DLGAP5Q15398 846 aa23.17■■□□□ 1.3
SMIM4-205ENST00000491607 PUS3Q9BZE2 481 aaKnown RBP23.17■■□□□ 1.3
SMIM4-205ENST00000491607 BICC1Q9H694 974 aaKnown RBP23.17■■□□□ 1.3
SMIM4-205ENST00000491607 SAGE1Q9NXZ1 904 aa23.16■■□□□ 1.3
SMIM4-205ENST00000491607 TRPA1O75762 1119 aa23.15■■□□□ 1.3
SMIM4-205ENST00000491607 ZBED3Q96IU2 234 aaPredicted RBP23.15■■□□□ 1.3
SMIM4-205ENST00000491607 CSRNP1Q96S65 589 aa23.15■■□□□ 1.3
SMIM4-205ENST00000491607 RNF186Q9NXI6 227 aa23.15■■□□□ 1.3
SMIM4-205ENST00000491607 PRKG1Q13976 671 aa23.14■■□□□ 1.29
SMIM4-205ENST00000491607 UBE4AQ14139 1066 aa23.14■■□□□ 1.29
SMIM4-205ENST00000491607 CDCA7LQ96GN5 454 aa23.14■■□□□ 1.29
SMIM4-205ENST00000491607 GYG1P46976 350 aa23.13■■□□□ 1.29
SMIM4-205ENST00000491607 FKBP1AP62942 108 aaKnown RBP23.13■■□□□ 1.29
SMIM4-205ENST00000491607 RABL6Q3YEC7 729 aaPredicted RBP23.13■■□□□ 1.29
SMIM4-205ENST00000491607 CFAP100Q494V2 611 aa23.13■■□□□ 1.29
SMIM4-205ENST00000491607 PCDHAC2Q9Y5I4 1007 aa23.13■■□□□ 1.29
SMIM4-205ENST00000491607 MROH5Q6ZUA9 1318 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 CCDC85CA6NKD9 419 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 MYO1BO43795 1136 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 HIBADHP31937 336 aaKnown RBP23.12■■□□□ 1.29
SMIM4-205ENST00000491607 RBM5P52756 815 aaKnown RBP eCLIP23.12■■□□□ 1.29
SMIM4-205ENST00000491607 DGKZQ13574 1117 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 REM2Q8IYK8 340 aaPredicted RBP23.12■■□□□ 1.29
SMIM4-205ENST00000491607 ANKRD44Q8N8A2 993 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 MTMR14Q8NCE2 650 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 MCOLN1Q9GZU1 580 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 SMC4Q9NTJ3 1288 aa23.12■■□□□ 1.29
SMIM4-205ENST00000491607 ARMC9Q7Z3E5 817 aa23.11■■□□□ 1.29
SMIM4-205ENST00000491607 DEFB129Q9H1M3 183 aa23.11■■□□□ 1.29
SMIM4-205ENST00000491607 RIPOR2Q9Y4F9 1068 aa23.11■■□□□ 1.29
SMIM4-205ENST00000491607 CLRN2A0PK11 232 aa23.1■■□□□ 1.29
SMIM4-205ENST00000491607 ALDH1L2Q3SY69 923 aa23.1■■□□□ 1.29
SMIM4-205ENST00000491607 LRRC24Q50LG9 513 aa23.1■■□□□ 1.29
SMIM4-205ENST00000491607 METTL24Q5JXM2 366 aa23.1■■□□□ 1.29
SMIM4-205ENST00000491607 MFSD14BQ5SR56 506 aa23.1■■□□□ 1.29
SMIM4-205ENST00000491607 TDRD7Q8NHU6 1098 aaKnown RBP23.1■■□□□ 1.29
SMIM4-205ENST00000491607 FAM84BQ96KN1 310 aaPredicted RBP23.1■■□□□ 1.29
SMIM4-205ENST00000491607 VEZTQ9HBM0 779 aa23.1■■□□□ 1.29
SMIM4-205ENST00000491607 COL1A1P02452 1464 aaPredicted RBP23.1■■□□□ 1.29
SMIM4-205ENST00000491607 SPDYE2BA6NHP3 402 aa23.09■■□□□ 1.29
SMIM4-205ENST00000491607 SPDYE6P0CI01 402 aa23.09■■□□□ 1.29
SMIM4-205ENST00000491607 MKRN3Q13064 507 aaKnown RBP23.09■■□□□ 1.29
SMIM4-205ENST00000491607 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
SMIM4-205ENST00000491607 PRMT6Q96LA8 375 aaPredicted RBP23.09■■□□□ 1.29
SMIM4-205ENST00000491607 USP44Q9H0E7 712 aa23.09■■□□□ 1.29
SMIM4-205ENST00000491607 ANGEL1Q9UNK9 670 aaKnown RBP23.09■■□□□ 1.29
SMIM4-205ENST00000491607 CASP8AP2Q9UKL3 1982 aa23.09■■□□□ 1.29
SMIM4-205ENST00000491607 FAM205AQ6ZU69 1335 aa23.08■■□□□ 1.29
SMIM4-205ENST00000491607 KLHDC4Q8TBB5 520 aa23.08■■□□□ 1.29
SMIM4-205ENST00000491607 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.08■■□□□ 1.29
SMIM4-205ENST00000491607 FZD1Q9UP38 647 aa23.08■■□□□ 1.29
SMIM4-205ENST00000491607 PTPN12Q05209 780 aaKnown RBP23.07■■□□□ 1.28
SMIM4-205ENST00000491607 TTF2Q9UNY4 1162 aaKnown RBP23.07■■□□□ 1.28
SMIM4-205ENST00000491607 IQSEC3Q9UPP2 1182 aaPredicted RBP23.07■■□□□ 1.28
SMIM4-205ENST00000491607 PPP2R3BQ9Y5P8 575 aa23.07■■□□□ 1.28
SMIM4-205ENST00000491607 FRAT2O75474 233 aaPredicted RBP23.06■■□□□ 1.28
SMIM4-205ENST00000491607 CAVIN4Q5BKX8 364 aa23.06■■□□□ 1.28
SMIM4-205ENST00000491607 AKAP11Q9UKA4 1901 aa23.06■■□□□ 1.28
SMIM4-205ENST00000491607 PDE8BO95263 885 aa23.05■■□□□ 1.28
SMIM4-205ENST00000491607 AOX1Q06278 1338 aa23.05■■□□□ 1.28
SMIM4-205ENST00000491607 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
SMIM4-205ENST00000491607 CHAF1AQ13111 956 aaPredicted RBP23.04■■□□□ 1.28
SMIM4-205ENST00000491607 TRMT2AQ8IZ69 625 aaKnown RBP23.04■■□□□ 1.28
SMIM4-205ENST00000491607 SERPINA10Q9UK55 444 aa23.04■■□□□ 1.28
SMIM4-205ENST00000491607 ECM29Q5VYK3 1845 aa23.03■■□□□ 1.28
SMIM4-205ENST00000491607 PPP1R12BO60237 982 aaPredicted RBP23.03■■□□□ 1.28
SMIM4-205ENST00000491607 SREBF2Q12772 1141 aa23.03■■□□□ 1.28
SMIM4-205ENST00000491607 SUPT20HL1Q3ZLR7 823 aa23.03■■□□□ 1.28
SMIM4-205ENST00000491607 LDLRAD1Q5T700 205 aa23.03■■□□□ 1.28
SMIM4-205ENST00000491607 FBXO33Q7Z6M2 555 aa23.03■■□□□ 1.28
SMIM4-205ENST00000491607 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
SMIM4-205ENST00000491607 NOB1Q9ULX3 412 aaKnown RBP23.03■■□□□ 1.28
SMIM4-205ENST00000491607 SSC5DA1L4H1 1573 aa23.02■■□□□ 1.28
SMIM4-205ENST00000491607 TBC1D8O95759 1140 aa23.02■■□□□ 1.28
SMIM4-205ENST00000491607 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
SMIM4-205ENST00000491607 RASA3Q14644 834 aa23.02■■□□□ 1.28
SMIM4-205ENST00000491607 UBTFL1P0CB47 393 aaPredicted RBP23.01■■□□□ 1.27
SMIM4-205ENST00000491607 TM4SF4P48230 202 aa23.01■■□□□ 1.27
SMIM4-205ENST00000491607 TNFAIP1Q13829 316 aa23.01■■□□□ 1.27
SMIM4-205ENST00000491607 PUM3Q15397 648 aaKnown RBP23.01■■□□□ 1.27
SMIM4-205ENST00000491607 NBPF12Q5TAG4 269 aaPredicted RBP23.01■■□□□ 1.27
SMIM4-205ENST00000491607 SPRYD7Q5W111 196 aa23.01■■□□□ 1.27
SMIM4-205ENST00000491607 SLC10A4Q96EP9 437 aa23.01■■□□□ 1.27
SMIM4-205ENST00000491607 TDRD3Q9H7E2 651 aaKnown RBP23.01■■□□□ 1.27
SMIM4-205ENST00000491607 ZNF70Q9UC06 446 aaPredicted RBP23.01■■□□□ 1.27
SMIM4-205ENST00000491607 ARAP2Q8WZ64 1704 aa23■■□□□ 1.27
SMIM4-205ENST00000491607 IFIT1P09914 478 aaKnown RBP23■■□□□ 1.27
SMIM4-205ENST00000491607 CRKP46108 304 aa23■■□□□ 1.27
SMIM4-205ENST00000491607 BCAMP50895 628 aa23■■□□□ 1.27
SMIM4-205ENST00000491607 SPDYE2Q495Y8 402 aa23■■□□□ 1.27
SMIM4-205ENST00000491607 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
SMIM4-205ENST00000491607 EYA2O00167 538 aa22.99■■□□□ 1.27
SMIM4-205ENST00000491607 GRIK5Q16478 980 aa22.99■■□□□ 1.27
SMIM4-205ENST00000491607 MAP3K11Q16584 847 aa22.99■■□□□ 1.27
SMIM4-205ENST00000491607 TBC1D22AQ8WUA7 517 aa22.99■■□□□ 1.27
SMIM4-205ENST00000491607 CLMNQ96JQ2 1002 aa22.99■■□□□ 1.27
SMIM4-205ENST00000491607 API5Q9BZZ5 524 aaKnown RBP22.99■■□□□ 1.27
SMIM4-205ENST00000491607 RFX5P48382 616 aaPredicted RBP22.98■■□□□ 1.27
SMIM4-205ENST00000491607 TCP10L2B9ZVM9 353 aa22.97■■□□□ 1.27
SMIM4-205ENST00000491607 IREB2P48200 963 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms