RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 HYPKQ9NX55 129 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 TRIM35Q9UPQ4 493 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 XDHP47989 1333 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 PDE8AO60658 829 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 BCAR3O75815 825 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 MS4A1P11836 297 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 ATP2B4P23634 1241 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 NUBP1P53384 320 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 RARSP54136 660 aaKnown RBP10.87□□□□□ -0.67
HPS4-215ENST00000491142 AAMPQ13685 434 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 DACT2Q5SW24 774 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
HPS4-215ENST00000491142 MYD88Q99836 296 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 PHAXQ9H814 394 aaKnown RBP10.87□□□□□ -0.67
HPS4-215ENST00000491142 FZD1Q9UP38 647 aa10.87□□□□□ -0.67
HPS4-215ENST00000491142 SASH1O94885 1247 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 HOXB7P09629 217 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 NF2P35240 595 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 LDLRAD1Q5T700 205 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 SPRYD7Q5W111 196 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 OGFOD1Q8N543 542 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 FBXW7Q969H0 707 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.86□□□□□ -0.67
HPS4-215ENST00000491142 TRIM17Q9Y577 477 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 PSME4Q14997 1843 aa10.86□□□□□ -0.67
HPS4-215ENST00000491142 PCCAP05165 728 aaPredicted RBP10.85□□□□□ -0.67
HPS4-215ENST00000491142 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
HPS4-215ENST00000491142 OTOP1Q7RTM1 612 aa10.85□□□□□ -0.67
HPS4-215ENST00000491142 ARMC9Q7Z3E5 817 aa10.85□□□□□ -0.67
HPS4-215ENST00000491142 ANGEL1Q9UNK9 670 aaKnown RBP10.85□□□□□ -0.67
HPS4-215ENST00000491142 STRIP1Q5VSL9 837 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 CCDC191Q8NCU4 936 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
HPS4-215ENST00000491142 MINPP1Q9UNW1 487 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 MED23Q9ULK4 1368 aa10.84□□□□□ -0.67
HPS4-215ENST00000491142 IGF2BP3O00425 579 aaKnown RBP eCLIP10.83□□□□□ -0.68
HPS4-215ENST00000491142 ELL2O00472 640 aaPredicted RBP10.83□□□□□ -0.68
HPS4-215ENST00000491142 ALDH1A1P00352 501 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 EN2P19622 333 aaPredicted RBP10.83□□□□□ -0.68
HPS4-215ENST00000491142 VASPP50552 380 aaPredicted RBP10.83□□□□□ -0.68
HPS4-215ENST00000491142 CCT4P50991 539 aaKnown RBP10.83□□□□□ -0.68
HPS4-215ENST00000491142 INTS3Q68E01 1043 aaKnown RBP10.83□□□□□ -0.68
HPS4-215ENST00000491142 APOBEC3FQ8IUX4 373 aaKnown RBP10.83□□□□□ -0.68
HPS4-215ENST00000491142 KIAA0825Q8IV33 1275 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 SLC10A4Q96EP9 437 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 CLMNQ96JQ2 1002 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 MBIPQ9NS73 344 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 MYO3BQ8WXR4 1341 aa10.83□□□□□ -0.68
HPS4-215ENST00000491142 MANSC4A6NHS7 340 aaPredicted RBP10.82□□□□□ -0.68
HPS4-215ENST00000491142 KLRK1P26718 216 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 FXR1P51114 621 aaKnown RBP eCLIP10.82□□□□□ -0.68
HPS4-215ENST00000491142 CTSWP56202 376 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 INHBEP58166 350 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 TTLL11Q8NHH1 800 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 CD99L2Q8TCZ2 262 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 ZBED3Q96IU2 234 aaPredicted RBP10.82□□□□□ -0.68
HPS4-215ENST00000491142 CDC5LQ99459 802 aaKnown RBP10.82□□□□□ -0.68
HPS4-215ENST00000491142 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
HPS4-215ENST00000491142 COA1Q9GZY4 146 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 GREM2Q9H772 168 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
HPS4-215ENST00000491142 PTPN22Q9Y2R2 807 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 SZT2Q5T011 3432 aa10.82□□□□□ -0.68
HPS4-215ENST00000491142 GTF2IP78347 998 aa10.81□□□□□ -0.68
HPS4-215ENST00000491142 CAP1Q01518 475 aa10.81□□□□□ -0.68
HPS4-215ENST00000491142 CALD1Q05682 793 aaKnown RBP10.81□□□□□ -0.68
HPS4-215ENST00000491142 WNK4Q96J92 1243 aa10.81□□□□□ -0.68
HPS4-215ENST00000491142 DEFB129Q9H1M3 183 aa10.81□□□□□ -0.68
HPS4-215ENST00000491142 PCDHAC2Q9Y5I4 1007 aa10.81□□□□□ -0.68
HPS4-215ENST00000491142 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
HPS4-215ENST00000491142 ZBTB48P10074 688 aaPredicted RBP10.8□□□□□ -0.68
HPS4-215ENST00000491142 CRHR2Q13324 411 aa10.8□□□□□ -0.68
HPS4-215ENST00000491142 MAP3K11Q16584 847 aa10.8□□□□□ -0.68
HPS4-215ENST00000491142 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
HPS4-215ENST00000491142 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
HPS4-215ENST00000491142 SSC5DA1L4H1 1573 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 IGKV5-2P06315 115 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 GJA5P36382 358 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 MMP14P50281 582 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 EXOSC9Q06265 439 aaKnown RBP10.79□□□□□ -0.68
HPS4-215ENST00000491142 ALDH1L2Q3SY69 923 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 LHX8Q68G74 356 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 CLUAP1Q96AJ1 413 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 ARMC5Q96C12 935 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 PTPN18Q99952 460 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 EFCC1Q9HA90 598 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
HPS4-215ENST00000491142 LEMD3Q9Y2U8 911 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 ZNF804BA4D1E1 1349 aa10.79□□□□□ -0.68
HPS4-215ENST00000491142 MAP3K13O43283 966 aa10.78□□□□□ -0.68
HPS4-215ENST00000491142 PPP1R12BO60237 982 aaPredicted RBP10.78□□□□□ -0.68
HPS4-215ENST00000491142 DDX58O95786 925 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms