RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 G2E3Q7L622 706 aa19.67■□□□□ 0.74
SCAMP3-208ENST00000490999 ERO1AQ96HE7 468 aa19.67■□□□□ 0.74
SCAMP3-208ENST00000490999 MPHOSPH8Q99549 860 aa19.67■□□□□ 0.74
SCAMP3-208ENST00000490999 ANKRD2Q9GZV1 360 aa19.67■□□□□ 0.74
SCAMP3-208ENST00000490999 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
SCAMP3-208ENST00000490999 RBBP6Q7Z6E9 1792 aaKnown RBP19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 PPP1R12BO60237 982 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 TAF5LO75529 589 aa19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 CALD1Q05682 793 aaKnown RBP19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 CFAP100Q494V2 611 aa19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 INTS3Q68E01 1043 aaKnown RBP19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 SZT2Q5T011 3432 aa19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 IRS2Q9Y4H2 1338 aa19.66■□□□□ 0.74
SCAMP3-208ENST00000490999 LAMB1P07942 1786 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 OTOFQ9HC10 1997 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 SPDYE2BA6NHP3 402 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 H7C1W4 665 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 SPDYE6P0CI01 402 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 MMP14P50281 582 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 INHBEP58166 350 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 ARMC5Q96C12 935 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 PTPN18Q99952 460 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 EFCC1Q9HA90 598 aa19.65■□□□□ 0.74
SCAMP3-208ENST00000490999 FXR1P51114 621 aaKnown RBP eCLIP19.64■□□□□ 0.73
SCAMP3-208ENST00000490999 CDAN1Q8IWY9 1227 aa19.64■□□□□ 0.73
SCAMP3-208ENST00000490999 STK31Q9BXU1 1019 aa19.64■□□□□ 0.73
SCAMP3-208ENST00000490999 ELP3Q9H9T3 547 aa19.64■□□□□ 0.73
SCAMP3-208ENST00000490999 PPP2R3BQ9Y5P8 575 aa19.64■□□□□ 0.73
SCAMP3-208ENST00000490999 KIAA0100Q14667 2235 aaKnown RBP19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 MYCP01106 439 aaPredicted RBP19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 IREB2P48200 963 aaKnown RBP19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 GCKRQ14397 625 aa19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 MTMR14Q8NCE2 650 aa19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 PRMT6Q96LA8 375 aaPredicted RBP19.63■□□□□ 0.73
SCAMP3-208ENST00000490999 A0A1B0GUL6 1792 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 MYO1BO43795 1136 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 RBM5P52756 815 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 CASP7P55210 303 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 SP3Q02447 781 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 RASA3Q14644 834 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 PLA2G12BQ9BX93 195 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 ECM29Q5VYK3 1845 aa19.62■□□□□ 0.73
SCAMP3-208ENST00000490999 USP2O75604 605 aaPredicted RBP19.61■□□□□ 0.73
SCAMP3-208ENST00000490999 SUPT20HL1Q3ZLR7 823 aa19.61■□□□□ 0.73
SCAMP3-208ENST00000490999 OPTNQ96CV9 577 aa19.61■□□□□ 0.73
SCAMP3-208ENST00000490999 PTCH2Q9Y6C5 1203 aa19.61■□□□□ 0.73
SCAMP3-208ENST00000490999 RANBP2P49792 3224 aaKnown RBP19.61■□□□□ 0.73
SCAMP3-208ENST00000490999 OTUD7BQ6GQQ9 843 aa19.6■□□□□ 0.73
SCAMP3-208ENST00000490999 ZNF804AQ7Z570 1209 aa19.6■□□□□ 0.73
SCAMP3-208ENST00000490999 ANKRD13AQ8IZ07 590 aa19.6■□□□□ 0.73
SCAMP3-208ENST00000490999 ZNF333Q96JL9 665 aa19.6■□□□□ 0.73
SCAMP3-208ENST00000490999 CHMP3Q9Y3E7 222 aa19.6■□□□□ 0.73
SCAMP3-208ENST00000490999 ANKRD18BA2A2Z9 1011 aa19.59■□□□□ 0.73
SCAMP3-208ENST00000490999 CSF1RP07333 972 aa19.59■□□□□ 0.73
SCAMP3-208ENST00000490999 COLQQ9Y215 455 aaPredicted RBP19.59■□□□□ 0.73
SCAMP3-208ENST00000490999 CEP290O15078 2479 aa19.59■□□□□ 0.73
SCAMP3-208ENST00000490999 SLC4A2P04920 1241 aa19.58■□□□□ 0.72
SCAMP3-208ENST00000490999 IL1R1P14778 569 aa19.58■□□□□ 0.72
SCAMP3-208ENST00000490999 FLIIQ13045 1269 aa19.58■□□□□ 0.72
SCAMP3-208ENST00000490999 BRI3BPQ8WY22 251 aa19.58■□□□□ 0.72
SCAMP3-208ENST00000490999 TMEM106CQ9BVX2 250 aa19.58■□□□□ 0.72
SCAMP3-208ENST00000490999 TESPA1A2RU30 521 aaPredicted RBP19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 FKBP5Q13451 457 aaPredicted RBP19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 TAF1CQ15572 869 aaPredicted RBP19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 SLC9C1Q4G0N8 1177 aa19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 MS4A4AQ96JQ5 239 aa19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 ZSWIM8A7E2V4 1837 aa19.57■□□□□ 0.72
SCAMP3-208ENST00000490999 TRIOBPQ9H2D6 2365 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 CCL15-CCL14A0A0B4J2E2 113 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 PLIN1O60240 522 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 VGLL4Q14135 290 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 CCL15Q16663 113 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 C15orf52Q6ZUT6 534 aaKnown RBP19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 DNAAF4Q8WXU2 420 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 ZNF594Q96JF6 807 aaPredicted RBP19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 ARHGAP39Q9C0H5 1083 aa19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 ZNF70Q9UC06 446 aaPredicted RBP19.56■□□□□ 0.72
SCAMP3-208ENST00000490999 UNCXA6NJT0 531 aa19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 ECM2O94769 699 aaPredicted RBP19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 IFIT5Q13325 482 aaKnown RBP19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 SLC4A8Q2Y0W8 1093 aa19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 SPDYE2Q495Y8 402 aa19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 SH3TC2Q8TF17 1288 aa19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 OTUD5Q96G74 571 aa19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 TMEM39BQ9GZU3 492 aa19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 TDRD3Q9H7E2 651 aaKnown RBP19.55■□□□□ 0.72
SCAMP3-208ENST00000490999 TCP10L2B9ZVM9 353 aa19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 FKBP1AP62942 108 aaKnown RBP19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 FOXO4P98177 505 aa19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 MFSD14BQ5SR56 506 aa19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 LINS1Q8NG48 757 aa19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 TEPSINQ96N21 525 aa19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms