RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 HDAC9Q9UKV0 1011 aa26.1■■□□□ 1.77
RGPD6-211ENST00000490990 CIAO1O76071 339 aa26.09■■□□□ 1.77
RGPD6-211ENST00000490990 FGFR2P21802 821 aa26.09■■□□□ 1.77
RGPD6-211ENST00000490990 FBXO33Q7Z6M2 555 aa26.09■■□□□ 1.77
RGPD6-211ENST00000490990 TMEM57Q8N5G2 664 aa26.09■■□□□ 1.77
RGPD6-211ENST00000490990 JAG2Q9Y219 1238 aa26.09■■□□□ 1.77
RGPD6-211ENST00000490990 ARAP2Q8WZ64 1704 aa26.08■■□□□ 1.77
RGPD6-211ENST00000490990 PUM3Q15397 648 aaKnown RBP26.08■■□□□ 1.77
RGPD6-211ENST00000490990 MTX1Q13505 466 aa26.07■■□□□ 1.76
RGPD6-211ENST00000490990 ZBED3Q96IU2 234 aaPredicted RBP26.07■■□□□ 1.76
RGPD6-211ENST00000490990 SIL1Q9H173 461 aa26.07■■□□□ 1.76
RGPD6-211ENST00000490990 COPRSQ9NQ92 184 aa26.07■■□□□ 1.76
RGPD6-211ENST00000490990 WDR33Q9C0J8 1336 aaKnown RBP26.07■■□□□ 1.76
RGPD6-211ENST00000490990 HSPA1AP0DMV8 641 aaKnown RBP26.06■■□□□ 1.76
RGPD6-211ENST00000490990 HSPA1BP0DMV9 641 aaKnown RBP26.06■■□□□ 1.76
RGPD6-211ENST00000490990 CAVIN4Q5BKX8 364 aa26.06■■□□□ 1.76
RGPD6-211ENST00000490990 PA2G4Q9UQ80 394 aaKnown RBP26.06■■□□□ 1.76
RGPD6-211ENST00000490990 THSD7BQ9C0I4 1608 aa26.06■■□□□ 1.76
RGPD6-211ENST00000490990 IFIT1P09914 478 aaKnown RBP26.05■■□□□ 1.76
RGPD6-211ENST00000490990 VPS37DQ86XT2 251 aa26.05■■□□□ 1.76
RGPD6-211ENST00000490990 CDCA5Q96FF9 252 aa26.05■■□□□ 1.76
RGPD6-211ENST00000490990 HHIPL1Q96JK4 782 aa26.05■■□□□ 1.76
RGPD6-211ENST00000490990 ECM29Q5VYK3 1845 aa26.04■■□□□ 1.76
RGPD6-211ENST00000490990 GNAI2P04899 355 aa26.04■■□□□ 1.76
RGPD6-211ENST00000490990 MFSD14BQ5SR56 506 aa26.04■■□□□ 1.76
RGPD6-211ENST00000490990 CYP4F22Q6NT55 531 aa26.04■■□□□ 1.76
RGPD6-211ENST00000490990 MTMR14Q8NCE2 650 aa26.04■■□□□ 1.76
RGPD6-211ENST00000490990 CAPNS2Q96L46 248 aa26.04■■□□□ 1.76
RGPD6-211ENST00000490990 F8W031 263 aaPredicted RBP26.03■■□□□ 1.76
RGPD6-211ENST00000490990 SRGAP3O43295 1099 aa26.03■■□□□ 1.76
RGPD6-211ENST00000490990 IL15P40933 162 aaPredicted RBP26.03■■□□□ 1.76
RGPD6-211ENST00000490990 ECE1P42892 770 aa26.03■■□□□ 1.76
RGPD6-211ENST00000490990 BCAMP50895 628 aa26.03■■□□□ 1.76
RGPD6-211ENST00000490990 PAXIP1Q6ZW49 1069 aaPredicted RBP26.03■■□□□ 1.76
RGPD6-211ENST00000490990 LPIN2Q92539 896 aa26.03■■□□□ 1.76
RGPD6-211ENST00000490990 GBA2Q9HCG7 927 aaPredicted RBP26.03■■□□□ 1.76
RGPD6-211ENST00000490990 CEP126Q9P2H0 1117 aa26.03■■□□□ 1.76
RGPD6-211ENST00000490990 SCAF8Q9UPN6 1271 aaKnown RBP26.03■■□□□ 1.76
RGPD6-211ENST00000490990 IQSEC3Q9UPP2 1182 aaPredicted RBP26.03■■□□□ 1.76
RGPD6-211ENST00000490990 SLC5A1P13866 664 aa26.02■■□□□ 1.76
RGPD6-211ENST00000490990 FTSJ3Q8IY81 847 aaKnown RBP26.02■■□□□ 1.76
RGPD6-211ENST00000490990 DZIP1LQ8IYY4 767 aaKnown RBP26.02■■□□□ 1.76
RGPD6-211ENST00000490990 RLBP1P12271 317 aa26.01■■□□□ 1.75
RGPD6-211ENST00000490990 DLGAP5Q15398 846 aa26.01■■□□□ 1.75
RGPD6-211ENST00000490990 C2orf69Q8N8R5 385 aa26.01■■□□□ 1.75
RGPD6-211ENST00000490990 MYH13Q9UKX3 1938 aa26.01■■□□□ 1.75
RGPD6-211ENST00000490990 HUNKP57058 714 aa26■■□□□ 1.75
RGPD6-211ENST00000490990 CFAP100Q494V2 611 aa26■■□□□ 1.75
RGPD6-211ENST00000490990 PCDHAC2Q9Y5I4 1007 aa26■■□□□ 1.75
RGPD6-211ENST00000490990 FRAT2O75474 233 aaPredicted RBP25.99■■□□□ 1.75
RGPD6-211ENST00000490990 ATP2B3Q16720 1220 aa25.99■■□□□ 1.75
RGPD6-211ENST00000490990 PNMA6EA0A0J9YXQ4 647 aa25.98■■□□□ 1.75
RGPD6-211ENST00000490990 SPDYE2BA6NHP3 402 aa25.98■■□□□ 1.75
RGPD6-211ENST00000490990 SPDYE6P0CI01 402 aa25.98■■□□□ 1.75
RGPD6-211ENST00000490990 CHAF1AQ13111 956 aaPredicted RBP25.98■■□□□ 1.75
RGPD6-211ENST00000490990 GRM1Q13255 1194 aa25.98■■□□□ 1.75
RGPD6-211ENST00000490990 APOBEC3FQ8IUX4 373 aaKnown RBP25.98■■□□□ 1.75
RGPD6-211ENST00000490990 TBC1D22AQ8WUA7 517 aa25.98■■□□□ 1.75
RGPD6-211ENST00000490990 WBP1LQ9NX94 342 aa25.98■■□□□ 1.75
RGPD6-211ENST00000490990 TTF2Q9UNY4 1162 aaKnown RBP25.98■■□□□ 1.75
RGPD6-211ENST00000490990 PAPPA2Q9BXP8 1791 aa25.97■■□□□ 1.75
RGPD6-211ENST00000490990 ITPRIPQ8IWB1 547 aa25.97■■□□□ 1.75
RGPD6-211ENST00000490990 PRMT6Q96LA8 375 aaPredicted RBP25.97■■□□□ 1.75
RGPD6-211ENST00000490990 GRIK5Q16478 980 aa25.96■■□□□ 1.75
RGPD6-211ENST00000490990 PRAMEF18Q5VWM3 479 aa25.96■■□□□ 1.75
RGPD6-211ENST00000490990 SERPINA10Q9UK55 444 aa25.96■■□□□ 1.75
RGPD6-211ENST00000490990 ZBTB7BO15156 539 aaPredicted RBP25.95■■□□□ 1.74
RGPD6-211ENST00000490990 AOC2O75106 756 aa25.95■■□□□ 1.74
RGPD6-211ENST00000490990 FKBP1BP68106 108 aa25.95■■□□□ 1.74
RGPD6-211ENST00000490990 MAP2K1Q02750 393 aaPredicted RBP25.95■■□□□ 1.74
RGPD6-211ENST00000490990 COL1A1P02452 1464 aaPredicted RBP25.95■■□□□ 1.74
RGPD6-211ENST00000490990 AOX1Q06278 1338 aa25.94■■□□□ 1.74
RGPD6-211ENST00000490990 MYO1BO43795 1136 aa25.94■■□□□ 1.74
RGPD6-211ENST00000490990 MAP2K2P36507 400 aa25.94■■□□□ 1.74
RGPD6-211ENST00000490990 RBM5P52756 815 aaKnown RBP eCLIP25.94■■□□□ 1.74
RGPD6-211ENST00000490990 RGMBQ6NW40 437 aa25.94■■□□□ 1.74
RGPD6-211ENST00000490990 FOXN1O15353 648 aa25.93■■□□□ 1.74
RGPD6-211ENST00000490990 CLRN2A0PK11 232 aa25.92■■□□□ 1.74
RGPD6-211ENST00000490990 TFCP2Q12800 502 aa25.92■■□□□ 1.74
RGPD6-211ENST00000490990 POLA2Q14181 598 aa25.92■■□□□ 1.74
RGPD6-211ENST00000490990 PANK1Q8TE04 598 aa25.92■■□□□ 1.74
RGPD6-211ENST00000490990 C1orf115Q9H7X2 142 aa25.92■■□□□ 1.74
RGPD6-211ENST00000490990 ADORA1P30542 326 aa25.91■■□□□ 1.74
RGPD6-211ENST00000490990 CRKP46108 304 aa25.91■■□□□ 1.74
RGPD6-211ENST00000490990 ATP8B2P98198 1209 aa25.91■■□□□ 1.74
RGPD6-211ENST00000490990 HDLBPQ00341 1268 aaKnown RBP25.91■■□□□ 1.74
RGPD6-211ENST00000490990 AIDAQ96BJ3 306 aa25.91■■□□□ 1.74
RGPD6-211ENST00000490990 DEFB129Q9H1M3 183 aa25.91■■□□□ 1.74
RGPD6-211ENST00000490990 SUGT1Q9Y2Z0 365 aa25.91■■□□□ 1.74
RGPD6-211ENST00000490990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.91■■□□□ 1.74
RGPD6-211ENST00000490990 FAM155AB1AL88 458 aaPredicted RBP25.9■■□□□ 1.74
RGPD6-211ENST00000490990 ZBTB22O15209 634 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 NF2P35240 595 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 PHKA1P46020 1223 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 TIMM10P62072 90 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 WDR66Q8TBY9 1149 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 SSH3Q8TE77 659 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 GNL3LQ9NVN8 582 aaKnown RBP25.9■■□□□ 1.74
RGPD6-211ENST00000490990 RCAN3Q9UKA8 241 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 AKAP2Q9Y2D5 859 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms