RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 HOMER1Q86YM7 354 aa22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 PFKFB2O60825 505 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 ETF1P62495 437 aaKnown RBP22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 TEX35Q5T0J7 233 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 FMR1NBQ8N0W7 255 aaPredicted RBP22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 SDF4Q9BRK5 362 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 LRRC2Q9BYS8 371 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 PHLPP2Q6ZVD8 1323 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 DHX8Q14562 1220 aaKnown RBP22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 DPCR1Q3MIW9 517 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 EDC3Q96F86 508 aaKnown RBP22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 SUCLG2Q96I99 432 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 BPIFA3Q9BQP9 254 aa22.47■■□□□ 1.19
SNAPC3-206ENST00000490969 C5P01031 1676 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 PARP4Q9UKK3 1724 aaKnown RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 CABP4P57796 275 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 MRPS27Q92552 414 aaKnown RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 TRERF1Q96PN7 1200 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 TSPYL1Q9H0U9 437 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 DBF4Q9UBU7 674 aaPredicted RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 PHLPP1O60346 1717 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 PTPDC1A2A3K4 754 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 NUTM2BA6NNL0 878 aaPredicted RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 NUTM2EB1AL46 878 aaPredicted RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 TPM4P67936 248 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 PDIA6Q15084 440 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 NUTM2AQ8IVF1 878 aaPredicted RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 IPO4Q8TEX9 1081 aaKnown RBP22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 KAZALD1Q96I82 304 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 DNAI1Q9UI46 699 aa22.46■■□□□ 1.19
SNAPC3-206ENST00000490969 CTDNEP1O95476 244 aa22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 SIL1Q9H173 461 aa22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 BICC1Q9H694 974 aaKnown RBP22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 U3KPZ7 1027 aaPredicted RBP22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 CYP21A2P08686 494 aa22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 ZRSR1Q15695 479 aaKnown RBP22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 KSR2Q6VAB6 950 aa22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 PCDHA7Q9UN72 937 aa22.45■■□□□ 1.18
SNAPC3-206ENST00000490969 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
SNAPC3-206ENST00000490969 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
SNAPC3-206ENST00000490969 POLR3GO15318 223 aaPredicted RBP22.44■■□□□ 1.18
SNAPC3-206ENST00000490969 KIAA1468Q9P260 1216 aa22.44■■□□□ 1.18
SNAPC3-206ENST00000490969 MRC1P22897 1456 aa22.44■■□□□ 1.18
SNAPC3-206ENST00000490969 CCP110O43303 1012 aa22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 MNS1Q8NEH6 495 aa22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 GRM8O00222 908 aa22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 RAD51AP2Q09MP3 1159 aa22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 ILDR1Q86SU0 546 aaPredicted RBP22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 NEK11Q8NG66 645 aa22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 SRRTQ9BXP5 876 aaKnown RBP22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 COL22A1Q8NFW1 1626 aaPredicted RBP22.43■■□□□ 1.18
SNAPC3-206ENST00000490969 A0A1B0GVL5 298 aa22.42■■□□□ 1.18
SNAPC3-206ENST00000490969 TADA3O75528 432 aa22.42■■□□□ 1.18
SNAPC3-206ENST00000490969 CCDC129Q6ZRS4 1044 aa22.42■■□□□ 1.18
SNAPC3-206ENST00000490969 TXLNBQ8N3L3 684 aa22.42■■□□□ 1.18
SNAPC3-206ENST00000490969 NDUFA8P51970 172 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 ADALQ6DHV7 355 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 TRIM65Q6PJ69 517 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 UBXN6Q9BZV1 441 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 A0A1W2PQ27 194 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 A0A1W2PQ64 194 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 A0A1W2PQD8 194 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 ATP8B1O43520 1251 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 SEC31AO94979 1220 aaKnown RBP22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 GUCY1B3Q02153 619 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 AIMP1Q12904 312 aaKnown RBP22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 FEZ2Q9UHY8 353 aaPredicted RBP22.41■■□□□ 1.18
SNAPC3-206ENST00000490969 EFCAB8A8MWE9 144 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 UBAP1LF5GYI3 381 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 STOX1Q6ZVD7 989 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 ZNF609O15014 1411 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 UTYO14607 1347 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 TPM1P09493 284 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 MYL6BP14649 208 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 APOBRQ0VD83 1088 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 LINS1Q8NG48 757 aa22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 SEC62Q99442 399 aaKnown RBP22.4■■□□□ 1.18
SNAPC3-206ENST00000490969 NEDD4P46934 1319 aa22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 TOM1O60784 492 aa22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 URI1O94763 535 aaPredicted RBP22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 CCT2P78371 535 aaKnown RBP22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 NCAPHQ15003 741 aa22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 KLHDC4Q8TBB5 520 aa22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 CARD6Q9BX69 1037 aa22.39■■□□□ 1.18
SNAPC3-206ENST00000490969 SALL1Q9NSC2 1324 aa22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 FANCGO15287 622 aa22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 NKX1-1Q15270 411 aaPredicted RBP22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 LRRFIP1Q32MZ4 808 aaKnown RBP22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 MUM1L1Q5H9M0 696 aa22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 CCDC158Q5M9N0 1113 aa22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 DHX32Q7L7V1 743 aaKnown RBP22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 RTEL1Q9NZ71 1219 aa22.39■■□□□ 1.17
SNAPC3-206ENST00000490969 CHGBP05060 677 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 HMGB1P09429 215 aaKnown RBP22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 TRIM34Q9BYJ4 488 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms