RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CCZ1P86791 482 aaPredicted RBP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 IDI1Q13907 227 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 RPAINQ86UA6 219 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 ABCC10Q5T3U5 1492 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 A0A0G2JS52 829 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 ALG1Q9BT22 464 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 TADA3O75528 432 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.354e-9■■■□□ 15
CRNKL1-204ENST00000490910 DHX58Q96C10 678 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 YY1AP1Q9H869 796 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 GEMIN8Q9NWZ8 242 aaKnown RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 KRT86O43790 486 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 SSBP05455 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 H2AFXP16104 143 aaPredicted RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 HAND2P61296 217 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 SPAG1Q07617 926 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 GOLIM4O00461 696 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 CYLC1P35663 651 aaPredicted RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 WHAMMP3Q1A5X7 153 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 CHST3Q7LGC8 479 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 RSRC1Q96IZ7 334 aaKnown RBP12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 RCOR1Q9UKL0 485 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
CRNKL1-204ENST00000490910 CCDC196A0A1B0GTZ2 297 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 PPFIA1Q13136 1202 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 LRCH2Q5VUJ6 765 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 PCDHA7Q9UN72 937 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 FOXO3O43524 673 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 RNF40O75150 1001 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 STX17P56962 302 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 TAF4BQ92750 862 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 NEBLO76041 1014 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 IFIT1P09914 478 aaKnown RBP12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 GUCY2CP25092 1073 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 E4F1Q66K89 784 aaPredicted RBP12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
CRNKL1-204ENST00000490910 ZNF213O14771 459 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 GNGT1P63211 74 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 FMNL3Q8IVF7 1028 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 NUP133Q8WUM0 1156 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 IQSEC2Q5JU85 1478 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 PLCH2O75038 1416 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 MYL6BP14649 208 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 DNA2P51530 1060 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 NDUFA8P51970 172 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 KRT83P78385 493 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 CASP8Q14790 479 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 TAX1BP1Q86VP1 789 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 CHPF2Q9P2E5 772 aa12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
CRNKL1-204ENST00000490910 MARCH6O60337 910 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 AFMP43652 599 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 VAV2P52735 878 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 CCDC122Q5T0U0 273 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 CFAP58Q5T655 872 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 CAPS2Q9BXY5 557 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 FANCLQ9NW38 375 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 ATP10AO60312 1499 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 IQCB1Q15051 598 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 NCOA7Q8NI08 942 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 MED14O60244 1454 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 GOLGA8AA7E2F4 631 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 IKBKBO14920 756 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 RESTQ13127 1097 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 CEP85LQ5SZL2 805 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 MLKLQ8NB16 471 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms