RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 COL9A3Q14050 684 aaPredicted RBP12.04□□□□□ -0.48
HDAC9-225ENST00000490851 OSBP2Q969R2 916 aa12.04□□□□□ -0.48
HDAC9-225ENST00000490851 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
HDAC9-225ENST00000490851 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
HDAC9-225ENST00000490851 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
HDAC9-225ENST00000490851 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
HDAC9-225ENST00000490851 UQCRFS1P1P0C7P4 283 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 GYG1P46976 350 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 RPS8P62241 208 aaKnown RBP12.03□□□□□ -0.48
HDAC9-225ENST00000490851 PRR5LQ6MZQ0 368 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 SPATA5Q8NB90 893 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 PDCL3Q9H2J4 239 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 HELLSQ9NRZ9 838 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
HDAC9-225ENST00000490851 AKAP11Q9UKA4 1901 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 ARID4AP29374 1257 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-225ENST00000490851 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
HDAC9-225ENST00000490851 SERPINB2P05120 415 aa12.02□□□□□ -0.48
HDAC9-225ENST00000490851 AK2P54819 239 aa12.02□□□□□ -0.48
HDAC9-225ENST00000490851 MYO5AQ9Y4I1 1855 aaKnown RBP12.02□□□□□ -0.49
HDAC9-225ENST00000490851 A0A0G2JLW4 131 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 KLRK1P26718 216 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 DDIT3P35638 169 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.49
HDAC9-225ENST00000490851 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDAC9-225ENST00000490851 PUS7LQ9H0K6 701 aaKnown RBP12.02□□□□□ -0.49
HDAC9-225ENST00000490851 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
HDAC9-225ENST00000490851 DTNBO60941 627 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 DDR1Q08345 913 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 VPS37DQ86XT2 251 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 IL17RAQ96F46 866 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
HDAC9-225ENST00000490851 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
HDAC9-225ENST00000490851 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 MAFGO15525 162 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
HDAC9-225ENST00000490851 TM4SF1P30408 202 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 MCM2P49736 904 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 ST5P78524 1137 aa12.01□□□□□ -0.49
HDAC9-225ENST00000490851 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
HDAC9-225ENST00000490851 PLSCR1O15162 318 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 ZFYP08048 801 aaPredicted RBP12□□□□□ -0.49
HDAC9-225ENST00000490851 CYP21A2P08686 494 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 MSL1Q68DK7 614 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 RUFY3Q7L099 469 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 COL23A1Q86Y22 540 aaPredicted RBP12□□□□□ -0.49
HDAC9-225ENST00000490851 APPBP2Q92624 585 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
HDAC9-225ENST00000490851 KCNB2Q92953 911 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 TTC14Q96N46 770 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 ZNF532Q9HCE3 1301 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 PDE6AP16499 860 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
HDAC9-225ENST00000490851 MYH7P12883 1935 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 GPAA1O43292 621 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 ADD2P35612 726 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 PKP1Q13835 747 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 FOXD4L5Q5VV16 416 aaPredicted RBP11.99□□□□□ -0.49
HDAC9-225ENST00000490851 BLOC1S2Q6QNY1 142 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 FOXD4L4Q8WXT5 416 aaPredicted RBP11.99□□□□□ -0.49
HDAC9-225ENST00000490851 ANKIB1Q9P2G1 1089 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
HDAC9-225ENST00000490851 POLRMTO00411 1230 aaKnown RBP11.99□□□□□ -0.49
HDAC9-225ENST00000490851 LARGE1O95461 756 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 PSMA5P28066 241 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 HAND2P61296 217 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 CAVIN4Q5BKX8 364 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 ZSCAN25Q6NSZ9 544 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 TNPO1Q92973 898 aaKnown RBP11.99□□□□□ -0.49
HDAC9-225ENST00000490851 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
HDAC9-225ENST00000490851 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 A0A1B0GUL6 1792 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 GRAPQ13588 217 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 GRAPLQ8TC17 118 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 DSCC1Q9BVC3 393 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 TM6SF1Q9BZW5 370 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 LRP2BPQ9P2M1 347 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 LIMCH1Q9UPQ0 1083 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 APPP05067 770 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 MAP3K12Q12852 859 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 STOX1Q6ZVD7 989 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 FAM84BQ96KN1 310 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
HDAC9-225ENST00000490851 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 GNL3LQ9NVN8 582 aaKnown RBP11.98□□□□□ -0.49
HDAC9-225ENST00000490851 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
HDAC9-225ENST00000490851 GPATCH11Q8N954 259 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms