RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
SRRM1-217ENST00000490543 HUNKP57058 714 aa11.88□□□□□ -0.51
SRRM1-217ENST00000490543 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
SRRM1-217ENST00000490543 METTL3Q86U44 580 aaKnown RBP11.88□□□□□ -0.51
SRRM1-217ENST00000490543 MPNDQ8N594 471 aa11.88□□□□□ -0.51
SRRM1-217ENST00000490543 SUPT20HQ8NEM7 779 aa11.88□□□□□ -0.51
SRRM1-217ENST00000490543 PNISRQ8TF01 805 aaKnown RBP11.88□□□□□ -0.51
SRRM1-217ENST00000490543 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
SRRM1-217ENST00000490543 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
SRRM1-217ENST00000490543 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
SRRM1-217ENST00000490543 NOGQ13253 232 aa11.87□□□□□ -0.51
SRRM1-217ENST00000490543 TNIP1Q15025 636 aa11.87□□□□□ -0.51
SRRM1-217ENST00000490543 PARP10Q53GL7 1025 aa11.87□□□□□ -0.51
SRRM1-217ENST00000490543 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
SRRM1-217ENST00000490543 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
SRRM1-217ENST00000490543 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
SRRM1-217ENST00000490543 FAM155AB1AL88 458 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-217ENST00000490543 RGS20O76081 388 aa11.86□□□□□ -0.51
SRRM1-217ENST00000490543 EGFRP00533 1210 aa11.86□□□□□ -0.51
SRRM1-217ENST00000490543 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
SRRM1-217ENST00000490543 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
SRRM1-217ENST00000490543 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
SRRM1-217ENST00000490543 POLR2AP24928 1970 aaKnown RBP11.85□□□□□ -0.51
SRRM1-217ENST00000490543 TAF1P21675 1872 aa11.85□□□□□ -0.51
SRRM1-217ENST00000490543 H7C1D1 291 aa11.85□□□□□ -0.51
SRRM1-217ENST00000490543 SOX10P56693 466 aa11.85□□□□□ -0.51
SRRM1-217ENST00000490543 PLEKHF1Q96S99 279 aa11.85□□□□□ -0.51
SRRM1-217ENST00000490543 KCNQ5Q9NR82 932 aa11.85□□□□□ -0.51
SRRM1-217ENST00000490543 ADM5C9JUS6 153 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-217ENST00000490543 PSMD14O00487 310 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 TRPA1O75762 1119 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-217ENST00000490543 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-217ENST00000490543 RGMBQ6NW40 437 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
SRRM1-217ENST00000490543 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
SRRM1-217ENST00000490543 LAMB2P55268 1798 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
SRRM1-217ENST00000490543 GRAPQ13588 217 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-217ENST00000490543 DPF2Q92785 391 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 GBA2Q9HCG7 927 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-217ENST00000490543 RNF186Q9NXI6 227 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 TRMT112Q9UI30 125 aaKnown RBP11.83□□□□□ -0.52
SRRM1-217ENST00000490543 DUOX1Q9NRD9 1551 aa11.83□□□□□ -0.52
SRRM1-217ENST00000490543 ZNF157P51786 506 aaPredicted RBP11.82□□□□□ -0.52
SRRM1-217ENST00000490543 COPS2P61201 443 aa11.82□□□□□ -0.52
SRRM1-217ENST00000490543 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
SRRM1-217ENST00000490543 CSRNP1Q96S65 589 aa11.82□□□□□ -0.52
SRRM1-217ENST00000490543 PRR14Q9BWN1 585 aa11.82□□□□□ -0.52
SRRM1-217ENST00000490543 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
SRRM1-217ENST00000490543 NEFMP07197 916 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 SLC10A3P09131 477 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 TCIRG1Q13488 830 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 WASHC4Q2M389 1173 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 C2orf69Q8N8R5 385 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 CELF1Q92879 486 aaKnown RBP11.81□□□□□ -0.52
SRRM1-217ENST00000490543 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 SAGE1Q9NXZ1 904 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 POLLQ9UGP5 575 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
SRRM1-217ENST00000490543 ASTN2O75129 1339 aaPredicted RBP11.81□□□□□ -0.52
SRRM1-217ENST00000490543 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
SRRM1-217ENST00000490543 RTL9Q8NET4 1388 aa11.8□□□□□ -0.52
SRRM1-217ENST00000490543 ANKRD36CQ5JPF3 1778 aa11.8□□□□□ -0.52
SRRM1-217ENST00000490543 GPSM2P81274 684 aa11.8□□□□□ -0.52
SRRM1-217ENST00000490543 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
SRRM1-217ENST00000490543 COL4A1P02462 1669 aa11.79□□□□□ -0.52
SRRM1-217ENST00000490543 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
SRRM1-217ENST00000490543 CFHP08603 1231 aa11.79□□□□□ -0.52
SRRM1-217ENST00000490543 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
SRRM1-217ENST00000490543 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
SRRM1-217ENST00000490543 ECE2O60344 883 aa11.78□□□□□ -0.52
SRRM1-217ENST00000490543 KRT24Q2M2I5 525 aa11.78□□□□□ -0.52
SRRM1-217ENST00000490543 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
SRRM1-217ENST00000490543 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
SRRM1-217ENST00000490543 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
SRRM1-217ENST00000490543 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
SRRM1-217ENST00000490543 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
SRRM1-217ENST00000490543 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
SRRM1-217ENST00000490543 RIPK4P57078 832 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 SF3B3Q15393 1217 aaKnown RBP11.77□□□□□ -0.53
SRRM1-217ENST00000490543 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-217ENST00000490543 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 TBC1D16Q8TBP0 767 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 CDCA5Q96FF9 252 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 GGA3Q9NZ52 723 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 LRRC37AA6NMS7 1700 aa11.77□□□□□ -0.53
SRRM1-217ENST00000490543 SCN9AQ15858 1988 aa11.76□□□□□ -0.53
SRRM1-217ENST00000490543 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms