RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 TMEM102Q8N9M5 508 aaPredicted RBP9.22□□□□□ -0.93
ITGA4-211ENST00000490435 GIMAP7Q8NHV1 300 aa9.22□□□□□ -0.93
ITGA4-211ENST00000490435 HELQQ8TDG4 1101 aa9.22□□□□□ -0.93
ITGA4-211ENST00000490435 PBXIP1Q96AQ6 731 aa9.22□□□□□ -0.93
ITGA4-211ENST00000490435 RNF114Q9Y508 228 aa9.22□□□□□ -0.93
ITGA4-211ENST00000490435 YBX3P16989 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
ITGA4-211ENST00000490435 GGNBP2Q9H3C7 697 aa9.21□□□□□ -0.94
ITGA4-211ENST00000490435 TRPA1O75762 1119 aa9.2□□□□□ -0.94
ITGA4-211ENST00000490435 PDGFAP04085 211 aa9.2□□□□□ -0.94
ITGA4-211ENST00000490435 MAP4P27816 1152 aaKnown RBP9.2□□□□□ -0.94
ITGA4-211ENST00000490435 MZF1P28698 734 aaPredicted RBP9.2□□□□□ -0.94
ITGA4-211ENST00000490435 NUTM2GQ5VZR2 741 aa9.2□□□□□ -0.94
ITGA4-211ENST00000490435 MFSD14AQ96MC6 490 aa9.2□□□□□ -0.94
ITGA4-211ENST00000490435 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
ITGA4-211ENST00000490435 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
ITGA4-211ENST00000490435 IKBKEQ14164 716 aa9.19□□□□□ -0.94
ITGA4-211ENST00000490435 BSNDQ8WZ55 320 aa9.19□□□□□ -0.94
ITGA4-211ENST00000490435 NXPE3Q969Y0 559 aa9.19□□□□□ -0.94
ITGA4-211ENST00000490435 OSMRQ99650 979 aa9.19□□□□□ -0.94
ITGA4-211ENST00000490435 CHRDQ9H2X0 955 aa9.19□□□□□ -0.94
ITGA4-211ENST00000490435 ATG3Q9NT62 314 aa9.19□□□□□ -0.94
ITGA4-211ENST00000490435 RXRBP28702 533 aa9.18□□□□□ -0.94
ITGA4-211ENST00000490435 SGO2Q562F6 1265 aa9.18□□□□□ -0.94
ITGA4-211ENST00000490435 HGSNATQ68CP4 663 aa9.18□□□□□ -0.94
ITGA4-211ENST00000490435 C12orf50Q8NA57 414 aaPredicted RBP9.18□□□□□ -0.94
ITGA4-211ENST00000490435 SUGCTQ9HAC7 445 aa9.18□□□□□ -0.94
ITGA4-211ENST00000490435 CYP4F12Q9HCS2 524 aa9.18□□□□□ -0.94
ITGA4-211ENST00000490435 A6NHS1 94 aa9.17□□□□□ -0.94
ITGA4-211ENST00000490435 SOX1O00570 391 aaPredicted RBP9.17□□□□□ -0.94
ITGA4-211ENST00000490435 EIF1AXP47813 144 aaKnown RBP9.17□□□□□ -0.94
ITGA4-211ENST00000490435 SMG8Q8ND04 991 aaKnown RBP9.17□□□□□ -0.94
ITGA4-211ENST00000490435 USP26Q9BXU7 913 aa9.17□□□□□ -0.94
ITGA4-211ENST00000490435 TMPRSS13Q9BYE2 586 aa9.17□□□□□ -0.94
ITGA4-211ENST00000490435 LEMD3Q9Y2U8 911 aa9.17□□□□□ -0.94
ITGA4-211ENST00000490435 EDN3P14138 238 aa9.16□□□□□ -0.94
ITGA4-211ENST00000490435 HOXA10P31260 410 aaPredicted RBP9.16□□□□□ -0.94
ITGA4-211ENST00000490435 LCE1DQ5T752 114 aa9.16□□□□□ -0.94
ITGA4-211ENST00000490435 ALKBH2Q6NS38 261 aa9.16□□□□□ -0.94
ITGA4-211ENST00000490435 VN1R5Q7Z5H4 357 aa9.16□□□□□ -0.94
ITGA4-211ENST00000490435 FBXL6Q8N531 539 aa9.16□□□□□ -0.94
ITGA4-211ENST00000490435 CCDC97Q96F63 343 aaPredicted RBP9.16□□□□□ -0.94
ITGA4-211ENST00000490435 ZKSCAN3Q9BRR0 538 aa9.16□□□□□ -0.94
ITGA4-211ENST00000490435 MPSTP25325 297 aa9.15□□□□□ -0.94
ITGA4-211ENST00000490435 CPSF6Q16630 551 aaKnown RBP eCLIP9.15□□□□□ -0.94
ITGA4-211ENST00000490435 OSBPL1AQ9BXW6 950 aa9.15□□□□□ -0.94
ITGA4-211ENST00000490435 SOX17Q9H6I2 414 aaPredicted RBP9.15□□□□□ -0.94
ITGA4-211ENST00000490435 ADGRE2Q9UHX3 823 aa9.15□□□□□ -0.94
ITGA4-211ENST00000490435 LOC100289279A0A1B0GTE1 492 aa9.14□□□□□ -0.95
ITGA4-211ENST00000490435 EREGO14944 169 aa9.14□□□□□ -0.95
ITGA4-211ENST00000490435 PHACTR2O75167 634 aa9.14□□□□□ -0.95
ITGA4-211ENST00000490435 TIAF1O95411 115 aa9.14□□□□□ -0.95
ITGA4-211ENST00000490435 ANGEL1Q9UNK9 670 aaKnown RBP9.14□□□□□ -0.95
ITGA4-211ENST00000490435 FAM95CA0A1B0GW59 222 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
ITGA4-211ENST00000490435 F13BP05160 661 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 FOSL1P15407 271 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 USP11P51784 963 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 PAOXQ6QHF9 649 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 ASAP3Q8TDY4 903 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 SNX29Q8TEQ0 813 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
ITGA4-211ENST00000490435 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 POLIQ9UNA4 740 aa9.13□□□□□ -0.95
ITGA4-211ENST00000490435 TNFRSF21O75509 655 aa9.12□□□□□ -0.95
ITGA4-211ENST00000490435 EHHADHQ08426 723 aa9.12□□□□□ -0.95
ITGA4-211ENST00000490435 AAMPQ13685 434 aa9.12□□□□□ -0.95
ITGA4-211ENST00000490435 EXOSC6Q5RKV6 272 aaKnown RBP9.12□□□□□ -0.95
ITGA4-211ENST00000490435 METTL22Q9BUU2 404 aaPredicted RBP9.12□□□□□ -0.95
ITGA4-211ENST00000490435 BHLHE41Q9C0J9 482 aaPredicted RBP9.12□□□□□ -0.95
ITGA4-211ENST00000490435 USP5P45974 858 aa9.11□□□□□ -0.95
ITGA4-211ENST00000490435 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
ITGA4-211ENST00000490435 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
ITGA4-211ENST00000490435 ABI1Q8IZP0 508 aa9.11□□□□□ -0.95
ITGA4-211ENST00000490435 DLGAP3O95886 979 aa9.1□□□□□ -0.95
ITGA4-211ENST00000490435 ESRRAP11474 423 aaPredicted RBP9.1□□□□□ -0.95
ITGA4-211ENST00000490435 DRD2P14416 443 aa9.1□□□□□ -0.95
ITGA4-211ENST00000490435 FBLIM1Q8WUP2 373 aa9.1□□□□□ -0.95
ITGA4-211ENST00000490435 YIPF2Q9BWQ6 316 aa9.1□□□□□ -0.95
ITGA4-211ENST00000490435 GSTM4Q03013 218 aa9.09□□□□□ -0.95
ITGA4-211ENST00000490435 CCDC39Q9UFE4 941 aa9.09□□□□□ -0.95
ITGA4-211ENST00000490435 PRNPP04156 253 aa9.08□□□□□ -0.96
ITGA4-211ENST00000490435 MTMR3Q13615 1198 aa9.08□□□□□ -0.96
ITGA4-211ENST00000490435 CDPF1Q6NVV7 123 aa9.08□□□□□ -0.96
ITGA4-211ENST00000490435 C2CD4AQ8NCU7 369 aaPredicted RBP9.08□□□□□ -0.96
ITGA4-211ENST00000490435 FBXL18Q96ME1 805 aa9.08□□□□□ -0.96
ITGA4-211ENST00000490435 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
ITGA4-211ENST00000490435 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
ITGA4-211ENST00000490435 FAM13AO94988 1023 aa9.07□□□□□ -0.96
ITGA4-211ENST00000490435 NPR3P17342 541 aa9.07□□□□□ -0.96
ITGA4-211ENST00000490435 SOX4Q06945 474 aaPredicted RBP9.07□□□□□ -0.96
ITGA4-211ENST00000490435 VSIG10LQ86VR7 867 aa9.07□□□□□ -0.96
ITGA4-211ENST00000490435 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
ITGA4-211ENST00000490435 CYP26A1O43174 497 aa9.06□□□□□ -0.96
ITGA4-211ENST00000490435 SSFA2P28290 1259 aa9.06□□□□□ -0.96
ITGA4-211ENST00000490435 PEAR1Q5VY43 1037 aaPredicted RBP9.06□□□□□ -0.96
ITGA4-211ENST00000490435 ZAR1Q86SH2 424 aa9.06□□□□□ -0.96
ITGA4-211ENST00000490435 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
ITGA4-211ENST00000490435 PRKAG2Q9UGJ0 569 aa9.06□□□□□ -0.96
ITGA4-211ENST00000490435 SHISA5Q8N114 240 aa9.05□□□□□ -0.96
ITGA4-211ENST00000490435 EZH1Q92800 747 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms