RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 SSH1Q8WYL5 1049 aa25.22■■□□□ 1.63
TSC2-215ENST00000490108 ZBED3Q96IU2 234 aaPredicted RBP25.22■■□□□ 1.63
TSC2-215ENST00000490108 PUS3Q9BZE2 481 aaKnown RBP25.22■■□□□ 1.63
TSC2-215ENST00000490108 BICC1Q9H694 974 aaKnown RBP25.22■■□□□ 1.63
TSC2-215ENST00000490108 SAGE1Q9NXZ1 904 aa25.22■■□□□ 1.63
TSC2-215ENST00000490108 UTYO14607 1347 aa25.21■■□□□ 1.63
TSC2-215ENST00000490108 CSRNP1Q96S65 589 aa25.21■■□□□ 1.63
TSC2-215ENST00000490108 RNF186Q9NXI6 227 aa25.21■■□□□ 1.63
TSC2-215ENST00000490108 TRPA1O75762 1119 aa25.2■■□□□ 1.62
TSC2-215ENST00000490108 SLFN5Q08AF3 891 aa25.2■■□□□ 1.62
TSC2-215ENST00000490108 MCOLN1Q9GZU1 580 aa25.2■■□□□ 1.62
TSC2-215ENST00000490108 PCDHAC2Q9Y5I4 1007 aa25.2■■□□□ 1.62
TSC2-215ENST00000490108 CCDC85CA6NKD9 419 aa25.19■■□□□ 1.62
TSC2-215ENST00000490108 PRKG1Q13976 671 aa25.19■■□□□ 1.62
TSC2-215ENST00000490108 ECM29Q5VYK3 1845 aa25.19■■□□□ 1.62
TSC2-215ENST00000490108 COL1A1P02452 1464 aaPredicted RBP25.18■■□□□ 1.62
TSC2-215ENST00000490108 GYG1P46976 350 aa25.18■■□□□ 1.62
TSC2-215ENST00000490108 DGKZQ13574 1117 aa25.18■■□□□ 1.62
TSC2-215ENST00000490108 UBE4AQ14139 1066 aa25.18■■□□□ 1.62
TSC2-215ENST00000490108 CFAP100Q494V2 611 aa25.18■■□□□ 1.62
TSC2-215ENST00000490108 ANKRD44Q8N8A2 993 aa25.18■■□□□ 1.62
TSC2-215ENST00000490108 CDCA7LQ96GN5 454 aa25.18■■□□□ 1.62
TSC2-215ENST00000490108 FKBP1AP62942 108 aaKnown RBP25.17■■□□□ 1.62
TSC2-215ENST00000490108 RABL6Q3YEC7 729 aaPredicted RBP25.17■■□□□ 1.62
TSC2-215ENST00000490108 ARMC9Q7Z3E5 817 aa25.17■■□□□ 1.62
TSC2-215ENST00000490108 MROH5Q6ZUA9 1318 aa25.16■■□□□ 1.62
TSC2-215ENST00000490108 CLRN2A0PK11 232 aa25.16■■□□□ 1.62
TSC2-215ENST00000490108 HIBADHP31937 336 aaKnown RBP25.16■■□□□ 1.62
TSC2-215ENST00000490108 MKRN3Q13064 507 aaKnown RBP25.16■■□□□ 1.62
TSC2-215ENST00000490108 REM2Q8IYK8 340 aaPredicted RBP25.16■■□□□ 1.62
TSC2-215ENST00000490108 MTMR14Q8NCE2 650 aa25.16■■□□□ 1.62
TSC2-215ENST00000490108 SMC4Q9NTJ3 1288 aa25.16■■□□□ 1.62
TSC2-215ENST00000490108 MYO1BO43795 1136 aa25.15■■□□□ 1.62
TSC2-215ENST00000490108 RBM5P52756 815 aaKnown RBP eCLIP25.15■■□□□ 1.62
TSC2-215ENST00000490108 METTL24Q5JXM2 366 aa25.15■■□□□ 1.62
TSC2-215ENST00000490108 DEFB129Q9H1M3 183 aa25.15■■□□□ 1.62
TSC2-215ENST00000490108 VEZTQ9HBM0 779 aa25.15■■□□□ 1.62
TSC2-215ENST00000490108 RIPOR2Q9Y4F9 1068 aa25.15■■□□□ 1.62
TSC2-215ENST00000490108 ARAP2Q8WZ64 1704 aa25.15■■□□□ 1.62
TSC2-215ENST00000490108 FAM205AQ6ZU69 1335 aa25.14■■□□□ 1.62
TSC2-215ENST00000490108 SPDYE2BA6NHP3 402 aa25.14■■□□□ 1.62
TSC2-215ENST00000490108 SPDYE6P0CI01 402 aa25.14■■□□□ 1.62
TSC2-215ENST00000490108 PTPN12Q05209 780 aaKnown RBP25.14■■□□□ 1.62
TSC2-215ENST00000490108 LRRC24Q50LG9 513 aa25.14■■□□□ 1.62
TSC2-215ENST00000490108 MFSD14BQ5SR56 506 aa25.14■■□□□ 1.62
TSC2-215ENST00000490108 TDRD7Q8NHU6 1098 aaKnown RBP25.14■■□□□ 1.62
TSC2-215ENST00000490108 FAM84BQ96KN1 310 aaPredicted RBP25.14■■□□□ 1.62
TSC2-215ENST00000490108 ANGEL1Q9UNK9 670 aaKnown RBP25.14■■□□□ 1.62
TSC2-215ENST00000490108 AOX1Q06278 1338 aa25.13■■□□□ 1.61
TSC2-215ENST00000490108 ALDH1L2Q3SY69 923 aa25.13■■□□□ 1.61
TSC2-215ENST00000490108 FZD1Q9UP38 647 aa25.13■■□□□ 1.61
TSC2-215ENST00000490108 VPS37DQ86XT2 251 aa25.12■■□□□ 1.61
TSC2-215ENST00000490108 KLHDC4Q8TBB5 520 aa25.12■■□□□ 1.61
TSC2-215ENST00000490108 PRMT6Q96LA8 375 aaPredicted RBP25.12■■□□□ 1.61
TSC2-215ENST00000490108 USP44Q9H0E7 712 aa25.12■■□□□ 1.61
TSC2-215ENST00000490108 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.12■■□□□ 1.61
TSC2-215ENST00000490108 SSC5DA1L4H1 1573 aa25.12■■□□□ 1.61
TSC2-215ENST00000490108 TTF2Q9UNY4 1162 aaKnown RBP25.11■■□□□ 1.61
TSC2-215ENST00000490108 IQSEC3Q9UPP2 1182 aaPredicted RBP25.11■■□□□ 1.61
TSC2-215ENST00000490108 PPP2R3BQ9Y5P8 575 aa25.11■■□□□ 1.61
TSC2-215ENST00000490108 CHAF1AQ13111 956 aaPredicted RBP25.1■■□□□ 1.61
TSC2-215ENST00000490108 LDLRAD1Q5T700 205 aa25.08■■□□□ 1.61
TSC2-215ENST00000490108 VGLL2Q8N8G2 317 aa25.08■■□□□ 1.61
TSC2-215ENST00000490108 FRAT2O75474 233 aaPredicted RBP25.07■■□□□ 1.6
TSC2-215ENST00000490108 PDE8BO95263 885 aa25.07■■□□□ 1.6
TSC2-215ENST00000490108 SREBF2Q12772 1141 aa25.07■■□□□ 1.6
TSC2-215ENST00000490108 CAVIN4Q5BKX8 364 aa25.07■■□□□ 1.6
TSC2-215ENST00000490108 FBXO33Q7Z6M2 555 aa25.07■■□□□ 1.6
TSC2-215ENST00000490108 TRMT2AQ8IZ69 625 aaKnown RBP25.07■■□□□ 1.6
TSC2-215ENST00000490108 SERPINA10Q9UK55 444 aa25.07■■□□□ 1.6
TSC2-215ENST00000490108 PPP1R12BO60237 982 aaPredicted RBP25.06■■□□□ 1.6
TSC2-215ENST00000490108 TBC1D8O95759 1140 aa25.06■■□□□ 1.6
TSC2-215ENST00000490108 SUPT20HL1Q3ZLR7 823 aa25.06■■□□□ 1.6
TSC2-215ENST00000490108 CCER2I3L3R5 266 aa25.05■■□□□ 1.6
TSC2-215ENST00000490108 RASA3Q14644 834 aa25.05■■□□□ 1.6
TSC2-215ENST00000490108 SPDYE2Q495Y8 402 aa25.05■■□□□ 1.6
TSC2-215ENST00000490108 NBPF12Q5TAG4 269 aaPredicted RBP25.05■■□□□ 1.6
TSC2-215ENST00000490108 SPRYD7Q5W111 196 aa25.05■■□□□ 1.6
TSC2-215ENST00000490108 TDRD3Q9H7E2 651 aaKnown RBP25.05■■□□□ 1.6
TSC2-215ENST00000490108 ZNF70Q9UC06 446 aaPredicted RBP25.05■■□□□ 1.6
TSC2-215ENST00000490108 CRKP46108 304 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 TM4SF4P48230 202 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 TNFAIP1Q13829 316 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 PUM3Q15397 648 aaKnown RBP25.04■■□□□ 1.6
TSC2-215ENST00000490108 GRIK5Q16478 980 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 MAP3K11Q16584 847 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 SLC10A4Q96EP9 437 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 CLMNQ96JQ2 1002 aa25.04■■□□□ 1.6
TSC2-215ENST00000490108 NOB1Q9ULX3 412 aaKnown RBP25.04■■□□□ 1.6
TSC2-215ENST00000490108 CT47B1P0C2W7 299 aaPredicted RBP25.03■■□□□ 1.6
TSC2-215ENST00000490108 UBTFL1P0CB47 393 aaPredicted RBP25.03■■□□□ 1.6
TSC2-215ENST00000490108 RFX5P48382 616 aaPredicted RBP25.03■■□□□ 1.6
TSC2-215ENST00000490108 BCAMP50895 628 aa25.03■■□□□ 1.6
TSC2-215ENST00000490108 CTU1Q7Z7A3 348 aaKnown RBP25.03■■□□□ 1.6
TSC2-215ENST00000490108 DZIP1LQ8IYY4 767 aaKnown RBP25.03■■□□□ 1.6
TSC2-215ENST00000490108 EYA2O00167 538 aa25.02■■□□□ 1.6
TSC2-215ENST00000490108 IFIT1P09914 478 aaKnown RBP25.02■■□□□ 1.6
TSC2-215ENST00000490108 IREB2P48200 963 aaKnown RBP25.02■■□□□ 1.6
TSC2-215ENST00000490108 TBC1D22AQ8WUA7 517 aa25.02■■□□□ 1.6
TSC2-215ENST00000490108 TCP10L2B9ZVM9 353 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms