RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 GMPSP49915 693 aaPredicted RBP21.44■■□□□ 1.02
ERCC3-207ENST00000490062 TBC1D22AQ8WUA7 517 aa21.44■■□□□ 1.02
ERCC3-207ENST00000490062 NEUROD6Q96NK8 337 aa21.44■■□□□ 1.02
ERCC3-207ENST00000490062 DBNDD2Q9BQY9 259 aa21.44■■□□□ 1.02
ERCC3-207ENST00000490062 MYH13Q9UKX3 1938 aa21.44■■□□□ 1.02
ERCC3-207ENST00000490062 UQCRFS1P1P0C7P4 283 aa21.43■■□□□ 1.02
ERCC3-207ENST00000490062 IL1RAPL2Q9NP60 686 aa21.43■■□□□ 1.02
ERCC3-207ENST00000490062 HACL1Q9UJ83 578 aa21.43■■□□□ 1.02
ERCC3-207ENST00000490062 DENND2AQ9ULE3 1009 aa21.43■■□□□ 1.02
ERCC3-207ENST00000490062 SUGT1Q9Y2Z0 365 aa21.43■■□□□ 1.02
ERCC3-207ENST00000490062 SALL1Q9NSC2 1324 aa21.43■■□□□ 1.02
ERCC3-207ENST00000490062 COL1A1P02452 1464 aaPredicted RBP21.43■■□□□ 1.02
ERCC3-207ENST00000490062 ZNF280AP59817 542 aaPredicted RBP21.42■■□□□ 1.02
ERCC3-207ENST00000490062 AACSQ86V21 672 aa21.42■■□□□ 1.02
ERCC3-207ENST00000490062 NMRK2Q9NPI5 230 aa21.42■■□□□ 1.02
ERCC3-207ENST00000490062 ZBTB12Q9Y330 459 aaPredicted RBP21.42■■□□□ 1.02
ERCC3-207ENST00000490062 KIF3CO14782 793 aa21.41■■□□□ 1.02
ERCC3-207ENST00000490062 RASGRF1Q13972 1273 aa21.41■■□□□ 1.02
ERCC3-207ENST00000490062 CCDC158Q5M9N0 1113 aa21.41■■□□□ 1.02
ERCC3-207ENST00000490062 CERS5Q8N5B7 392 aa21.41■■□□□ 1.02
ERCC3-207ENST00000490062 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
ERCC3-207ENST00000490062 TAF1DQ9H5J8 278 aaPredicted RBP21.41■■□□□ 1.02
ERCC3-207ENST00000490062 RRAGCQ9HB90 399 aa21.41■■□□□ 1.02
ERCC3-207ENST00000490062 AKAP11Q9UKA4 1901 aa21.4■■□□□ 1.02
ERCC3-207ENST00000490062 IGSF3O75054 1194 aa21.4■■□□□ 1.02
ERCC3-207ENST00000490062 IGHDP01880 384 aa21.4■■□□□ 1.02
ERCC3-207ENST00000490062 LMOD1P29536 600 aaPredicted RBP21.4■■□□□ 1.02
ERCC3-207ENST00000490062 GORABQ5T7V8 394 aa21.4■■□□□ 1.02
ERCC3-207ENST00000490062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.4■■□□□ 1.02
ERCC3-207ENST00000490062 CCDC8Q9H0W5 538 aaPredicted RBP21.4■■□□□ 1.02
ERCC3-207ENST00000490062 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
ERCC3-207ENST00000490062 CNOT7Q9UIV1 285 aaKnown RBP21.4■■□□□ 1.02
ERCC3-207ENST00000490062 ADAMTSL1Q8N6G6 1762 aa21.39■■□□□ 1.01
ERCC3-207ENST00000490062 FRAT2O75474 233 aaPredicted RBP21.39■■□□□ 1.01
ERCC3-207ENST00000490062 MFSD14BQ5SR56 506 aa21.39■■□□□ 1.01
ERCC3-207ENST00000490062 ERICH6BQ5W0A0 696 aa21.39■■□□□ 1.01
ERCC3-207ENST00000490062 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
ERCC3-207ENST00000490062 ADARB2Q9NS39 739 aaKnown RBP21.39■■□□□ 1.01
ERCC3-207ENST00000490062 APBB1O00213 710 aa21.38■■□□□ 1.01
ERCC3-207ENST00000490062 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
ERCC3-207ENST00000490062 USP17L8P0C7I0 530 aa21.38■■□□□ 1.01
ERCC3-207ENST00000490062 EPHX2P34913 555 aa21.38■■□□□ 1.01
ERCC3-207ENST00000490062 EPS15P42566 896 aa21.38■■□□□ 1.01
ERCC3-207ENST00000490062 USP50Q70EL3 339 aaPredicted RBP21.38■■□□□ 1.01
ERCC3-207ENST00000490062 PNMA8AQ86V59 439 aaPredicted RBP21.38■■□□□ 1.01
ERCC3-207ENST00000490062 MICALL2Q8IY33 904 aa21.38■■□□□ 1.01
ERCC3-207ENST00000490062 MRIQ9BWK5 157 aa21.38■■□□□ 1.01
ERCC3-207ENST00000490062 IQSEC3Q9UPP2 1182 aaPredicted RBP21.38■■□□□ 1.01
ERCC3-207ENST00000490062 H7C1D1 291 aa21.37■■□□□ 1.01
ERCC3-207ENST00000490062 MCAMP43121 646 aa21.37■■□□□ 1.01
ERCC3-207ENST00000490062 ZGPATQ8N5A5 531 aaKnown RBP21.37■■□□□ 1.01
ERCC3-207ENST00000490062 MXD3Q9BW11 206 aa21.37■■□□□ 1.01
ERCC3-207ENST00000490062 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
ERCC3-207ENST00000490062 NEFLP07196 543 aa21.36■■□□□ 1.01
ERCC3-207ENST00000490062 HDLBPQ00341 1268 aaKnown RBP21.36■■□□□ 1.01
ERCC3-207ENST00000490062 TTC39AQ5SRH9 613 aa21.36■■□□□ 1.01
ERCC3-207ENST00000490062 SPATA5Q8NB90 893 aa21.36■■□□□ 1.01
ERCC3-207ENST00000490062 MTMR14Q8NCE2 650 aa21.36■■□□□ 1.01
ERCC3-207ENST00000490062 SALL3Q9BXA9 1300 aa21.35■■□□□ 1.01
ERCC3-207ENST00000490062 SMARCA5O60264 1052 aaPredicted RBP21.35■■□□□ 1.01
ERCC3-207ENST00000490062 CHAF1AQ13111 956 aaPredicted RBP21.35■■□□□ 1.01
ERCC3-207ENST00000490062 SCARF1Q14162 830 aa21.35■■□□□ 1.01
ERCC3-207ENST00000490062 OGFOD1Q8N543 542 aa21.35■■□□□ 1.01
ERCC3-207ENST00000490062 FBXW7Q969H0 707 aa21.35■■□□□ 1.01
ERCC3-207ENST00000490062 PGAP2Q9UHJ9 254 aa21.35■■□□□ 1.01
ERCC3-207ENST00000490062 HDAC9Q9UKV0 1011 aa21.35■■□□□ 1.01
ERCC3-207ENST00000490062 ATP5JP18859 108 aa21.34■■□□□ 1.01
ERCC3-207ENST00000490062 ZC3H15Q8WU90 426 aaKnown RBP21.34■■□□□ 1.01
ERCC3-207ENST00000490062 ZBED3Q96IU2 234 aaPredicted RBP21.34■■□□□ 1.01
ERCC3-207ENST00000490062 MAST3O60307 1309 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 SHTN1A0MZ66 631 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 NUCB1Q02818 461 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 KIAA0825Q8IV33 1275 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 JAG2Q9Y219 1238 aa21.33■■□□□ 1.01
ERCC3-207ENST00000490062 TOMM70O94826 608 aa21.32■■□□□ 1
ERCC3-207ENST00000490062 LDHDQ86WU2 507 aa21.32■■□□□ 1
ERCC3-207ENST00000490062 RBM46Q8TBY0 533 aaKnown RBP21.32■■□□□ 1
ERCC3-207ENST00000490062 MYOZ2Q9NPC6 264 aa21.32■■□□□ 1
ERCC3-207ENST00000490062 TTC41PQ6P2S7 1318 aa21.31■■□□□ 1
ERCC3-207ENST00000490062 HIRAP54198 1017 aaPredicted RBP21.31■■□□□ 1
ERCC3-207ENST00000490062 GRIK5Q16478 980 aa21.31■■□□□ 1
ERCC3-207ENST00000490062 KIF4BQ2VIQ3 1234 aa21.31■■□□□ 1
ERCC3-207ENST00000490062 SPTY2D1Q68D10 685 aaPredicted RBP21.31■■□□□ 1
ERCC3-207ENST00000490062 TMED8Q6PL24 325 aaPredicted RBP21.31■■□□□ 1
ERCC3-207ENST00000490062 PI16Q6UXB8 463 aa21.31■■□□□ 1
ERCC3-207ENST00000490062 TRPM4Q8TD43 1214 aa21.31■■□□□ 1
ERCC3-207ENST00000490062 ECHDC1Q9NTX5 307 aa21.31■■□□□ 1
ERCC3-207ENST00000490062 PRDX5P30044 214 aa21.3■■□□□ 1
ERCC3-207ENST00000490062 HHIPL2Q6UWX4 724 aa21.3■■□□□ 1
ERCC3-207ENST00000490062 SAMD7Q7Z3H4 446 aa21.3■■□□□ 1
ERCC3-207ENST00000490062 CHD1LQ86WJ1 897 aa21.3■■□□□ 1
ERCC3-207ENST00000490062 ZBTB47Q9UFB7 747 aaPredicted RBP21.3■■□□□ 1
ERCC3-207ENST00000490062 STAP2Q9UGK3 403 aa21.3■■□□□ 1
ERCC3-207ENST00000490062 TTF2Q9UNY4 1162 aaKnown RBP21.3■■□□□ 1
ERCC3-207ENST00000490062 EGFRP00533 1210 aa21.29■■□□□ 1
ERCC3-207ENST00000490062 CYP2E1P05181 493 aaPredicted RBP21.29■■□□□ 1
ERCC3-207ENST00000490062 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
ERCC3-207ENST00000490062 ZAP70P43403 619 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms