RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 SPATA5Q8NB90 893 aa31.31■■■□□ 2.6
KCNC4-207ENST00000489935 WWC3Q9ULE0 1092 aa31.31■■■□□ 2.6
KCNC4-207ENST00000489935 CNTNAP4Q9C0A0 1308 aa31.31■■■□□ 2.6
KCNC4-207ENST00000489935 ZNF532Q9HCE3 1301 aa31.31■■■□□ 2.6
KCNC4-207ENST00000489935 ATRNO75882 1429 aa31.3■■■□□ 2.6
KCNC4-207ENST00000489935 TCRBV5S4A2TA0A5A2 114 aa31.3■■■□□ 2.6
KCNC4-207ENST00000489935 PDE6AP16499 860 aa31.3■■■□□ 2.6
KCNC4-207ENST00000489935 UBE2HP62256 183 aa31.3■■■□□ 2.6
KCNC4-207ENST00000489935 RASGRF1Q13972 1273 aa31.3■■■□□ 2.6
KCNC4-207ENST00000489935 C3orf67Q6ZVT6 689 aa31.3■■■□□ 2.6
KCNC4-207ENST00000489935 SMARCC2Q8TAQ2 1214 aa31.29■■■□□ 2.6
KCNC4-207ENST00000489935 BTAF1O14981 1849 aa31.29■■■□□ 2.6
KCNC4-207ENST00000489935 CTDNEP1O95476 244 aa31.28■■■□□ 2.6
KCNC4-207ENST00000489935 CHRNDQ07001 517 aa31.28■■■□□ 2.6
KCNC4-207ENST00000489935 FAM182BQ5T319 152 aa31.28■■■□□ 2.6
KCNC4-207ENST00000489935 FAM173BQ6P4H8 233 aa31.28■■■□□ 2.6
KCNC4-207ENST00000489935 SYAP1Q96A49 352 aaPredicted RBP31.28■■■□□ 2.6
KCNC4-207ENST00000489935 DDX11Q96FC9 970 aa31.28■■■□□ 2.6
KCNC4-207ENST00000489935 LLPHQ9BRT6 129 aaKnown RBP31.28■■■□□ 2.6
KCNC4-207ENST00000489935 BCL2L12Q9HB09 334 aa31.28■■■□□ 2.6
KCNC4-207ENST00000489935 TAF1P21675 1872 aa31.27■■■□□ 2.6
KCNC4-207ENST00000489935 TPRNQ4KMQ1 711 aa31.27■■■□□ 2.6
KCNC4-207ENST00000489935 FBXL16Q8N461 479 aa31.27■■■□□ 2.6
KCNC4-207ENST00000489935 CASZ1Q86V15 1759 aa31.27■■■□□ 2.6
KCNC4-207ENST00000489935 BCAMP50895 628 aa31.26■■■□□ 2.6
KCNC4-207ENST00000489935 DOCK2Q92608 1830 aa31.26■■■□□ 2.59
KCNC4-207ENST00000489935 ZNF213O14771 459 aa31.26■■■□□ 2.59
KCNC4-207ENST00000489935 PDIA3P30101 505 aaKnown RBP31.26■■■□□ 2.59
KCNC4-207ENST00000489935 CCT2P78371 535 aaKnown RBP31.26■■■□□ 2.59
KCNC4-207ENST00000489935 TBC1D9BQ66K14 1250 aa31.26■■■□□ 2.59
KCNC4-207ENST00000489935 BICDL1Q6ZP65 573 aa31.26■■■□□ 2.59
KCNC4-207ENST00000489935 NSUN7Q8NE18 718 aaKnown RBP31.26■■■□□ 2.59
KCNC4-207ENST00000489935 ZNF274Q96GC6 653 aaPredicted RBP31.26■■■□□ 2.59
KCNC4-207ENST00000489935 GPHNQ9NQX3 736 aaPredicted RBP31.26■■■□□ 2.59
KCNC4-207ENST00000489935 THSD7AQ9UPZ6 1657 aa31.25■■■□□ 2.59
KCNC4-207ENST00000489935 MB21D2Q8IYB1 491 aaPredicted RBP31.25■■■□□ 2.59
KCNC4-207ENST00000489935 CSPP1Q1MSJ5 1256 aa31.25■■■□□ 2.59
KCNC4-207ENST00000489935 NBPF3Q9H094 633 aa31.25■■■□□ 2.59
KCNC4-207ENST00000489935 SF3B3Q15393 1217 aaKnown RBP31.24■■■□□ 2.59
KCNC4-207ENST00000489935 RC3H1Q5TC82 1133 aaKnown RBP31.24■■■□□ 2.59
KCNC4-207ENST00000489935 SCN7AQ01118 1682 aa31.23■■■□□ 2.59
KCNC4-207ENST00000489935 EVCP57679 992 aa31.23■■■□□ 2.59
KCNC4-207ENST00000489935 CDC5LQ99459 802 aaKnown RBP31.23■■■□□ 2.59
KCNC4-207ENST00000489935 NCOA5Q9HCD5 579 aaKnown RBP31.23■■■□□ 2.59
KCNC4-207ENST00000489935 SPATA31A6Q5VVP1 1343 aa31.23■■■□□ 2.59
KCNC4-207ENST00000489935 RPS6KA4O75676 772 aa31.22■■■□□ 2.59
KCNC4-207ENST00000489935 KRT85P78386 507 aa31.22■■■□□ 2.59
KCNC4-207ENST00000489935 NCOA7Q8NI08 942 aa31.22■■■□□ 2.59
KCNC4-207ENST00000489935 STRBPQ96SI9 672 aaKnown RBP31.22■■■□□ 2.59
KCNC4-207ENST00000489935 NAP1L2Q9ULW6 460 aaPredicted RBP31.22■■■□□ 2.59
KCNC4-207ENST00000489935 NHSQ6T4R5 1651 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 PRC1O43663 620 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 MCM5P33992 734 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 ANTXR2P58335 489 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 TTC6Q86TZ1 520 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 FAM43AQ8N2R8 423 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 MAGEB6Q8N7X4 407 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 SRP68Q9UHB9 627 aaKnown RBP31.21■■■□□ 2.59
KCNC4-207ENST00000489935 NARFQ9UHQ1 456 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 PTPDC1A2A3K4 754 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 RGL2O15211 777 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 FAM184AQ8NB25 1140 aa31.21■■■□□ 2.59
KCNC4-207ENST00000489935 APPP05067 770 aa31.2■■■□□ 2.59
KCNC4-207ENST00000489935 MAP3K12Q12852 859 aa31.2■■■□□ 2.59
KCNC4-207ENST00000489935 ANKRD18AQ8IVF6 992 aa31.2■■■□□ 2.59
KCNC4-207ENST00000489935 A0A1B0GUL6 1792 aa31.19■■■□□ 2.58
KCNC4-207ENST00000489935 SLC10A5Q5PT55 438 aa31.19■■■□□ 2.58
KCNC4-207ENST00000489935 CCDC183Q5T5S1 534 aa31.19■■■□□ 2.58
KCNC4-207ENST00000489935 WTIPA6NIX2 430 aaPredicted RBP31.19■■■□□ 2.58
KCNC4-207ENST00000489935 RESTQ13127 1097 aa31.19■■■□□ 2.58
KCNC4-207ENST00000489935 AIDAQ96BJ3 306 aa31.19■■■□□ 2.58
KCNC4-207ENST00000489935 DENND2AQ9ULE3 1009 aa31.19■■■□□ 2.58
KCNC4-207ENST00000489935 SALL1Q9NSC2 1324 aa31.18■■■□□ 2.58
KCNC4-207ENST00000489935 TBC1D10CQ8IV04 446 aa31.18■■■□□ 2.58
KCNC4-207ENST00000489935 NKX2-3Q8TAU0 364 aa31.18■■■□□ 2.58
KCNC4-207ENST00000489935 TFIP11Q9UBB9 837 aaKnown RBP31.18■■■□□ 2.58
KCNC4-207ENST00000489935 H3BQV1 296 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 GNPATO15228 680 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 PHF14O94880 888 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 IFFO2Q5TF58 517 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 RALYLQ86SE5 291 aaKnown RBP31.17■■■□□ 2.58
KCNC4-207ENST00000489935 AMIGO3Q86WK7 504 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 PPP1R9BQ96SB3 815 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 BSDC1Q9NW68 430 aaPredicted RBP31.17■■■□□ 2.58
KCNC4-207ENST00000489935 CCNL1Q9UK58 526 aaPredicted RBP31.17■■■□□ 2.58
KCNC4-207ENST00000489935 HMGN5P82970 282 aaKnown RBP31.17■■■□□ 2.58
KCNC4-207ENST00000489935 TSPY26PQ9H489 355 aa31.17■■■□□ 2.58
KCNC4-207ENST00000489935 GTF2E1P29083 439 aaPredicted RBP31.16■■■□□ 2.58
KCNC4-207ENST00000489935 CCDC173Q0VFZ6 552 aa31.16■■■□□ 2.58
KCNC4-207ENST00000489935 ELP1O95163 1332 aa31.16■■■□□ 2.58
KCNC4-207ENST00000489935 PPFIA3O75145 1194 aa31.15■■■□□ 2.58
KCNC4-207ENST00000489935 MBD4O95243 580 aa31.15■■■□□ 2.58
KCNC4-207ENST00000489935 CELF1Q92879 486 aaKnown RBP31.15■■■□□ 2.58
KCNC4-207ENST00000489935 WDR19Q8NEZ3 1342 aa31.15■■■□□ 2.58
KCNC4-207ENST00000489935 PATL2C9JE40 543 aaKnown RBP31.14■■■□□ 2.58
KCNC4-207ENST00000489935 ALX1Q15699 326 aa31.14■■■□□ 2.58
KCNC4-207ENST00000489935 GJD4Q96KN9 370 aaPredicted RBP31.14■■■□□ 2.58
KCNC4-207ENST00000489935 SETDB2Q96T68 719 aa31.14■■■□□ 2.58
KCNC4-207ENST00000489935 ARMT1Q9H993 441 aa31.14■■■□□ 2.58
KCNC4-207ENST00000489935 MINPP1Q9UNW1 487 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms